Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
DDX60Q8IY21 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
DDX60Q8IY21 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC29.8■■■□□ 2.36
DDX60Q8IY21 SENP5-202ENST00000419026 973 ntTSL 3 BASIC29.8■■■□□ 2.36
DDX60Q8IY21 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
DDX60Q8IY21 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC29.8■■■□□ 2.36
DDX60Q8IY21 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC29.8■■■□□ 2.36
DDX60Q8IY21 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC29.8■■■□□ 2.36
DDX60Q8IY21 AC021242.3-201ENST00000607598 1377 ntBASIC29.8■■■□□ 2.36
DDX60Q8IY21 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC29.8■■■□□ 2.36
DDX60Q8IY21 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
DDX60Q8IY21 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
DDX60Q8IY21 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC29.78■■■□□ 2.36
DDX60Q8IY21 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC29.78■■■□□ 2.36
DDX60Q8IY21 AC011551.1-201ENST00000614101 683 ntBASIC29.78■■■□□ 2.36
DDX60Q8IY21 SNAI3-AS1-204ENST00000567997 2048 ntBASIC29.77■■■□□ 2.36
DDX60Q8IY21 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC29.77■■■□□ 2.36
DDX60Q8IY21 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC29.77■■■□□ 2.36
DDX60Q8IY21 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
DDX60Q8IY21 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC29.76■■■□□ 2.36
DDX60Q8IY21 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC29.76■■■□□ 2.35
DDX60Q8IY21 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC29.76■■■□□ 2.35
DDX60Q8IY21 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
DDX60Q8IY21 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
DDX60Q8IY21 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
DDX60Q8IY21 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC29.75■■■□□ 2.35
DDX60Q8IY21 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC29.75■■■□□ 2.35
DDX60Q8IY21 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC29.75■■■□□ 2.35
DDX60Q8IY21 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
DDX60Q8IY21 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC29.75■■■□□ 2.35
DDX60Q8IY21 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC29.74■■■□□ 2.35
DDX60Q8IY21 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
DDX60Q8IY21 LSM7-203ENST00000585409 512 ntTSL 2 BASIC29.74■■■□□ 2.35
DDX60Q8IY21 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC29.74■■■□□ 2.35
DDX60Q8IY21 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
DDX60Q8IY21 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC29.74■■■□□ 2.35
DDX60Q8IY21 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
DDX60Q8IY21 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC29.74■■■□□ 2.35
DDX60Q8IY21 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
DDX60Q8IY21 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
DDX60Q8IY21 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
DDX60Q8IY21 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC29.73■■■□□ 2.35
DDX60Q8IY21 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC29.73■■■□□ 2.35
DDX60Q8IY21 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC29.72■■■□□ 2.35
DDX60Q8IY21 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC29.72■■■□□ 2.35
DDX60Q8IY21 AC131281.2-201ENST00000520478 145 ntBASIC29.72■■■□□ 2.35
DDX60Q8IY21 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC29.72■■■□□ 2.35
DDX60Q8IY21 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC29.72■■■□□ 2.35
DDX60Q8IY21 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
DDX60Q8IY21 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC29.71■■■□□ 2.35
DDX60Q8IY21 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC29.7■■■□□ 2.35
DDX60Q8IY21 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC29.7■■■□□ 2.34
DDX60Q8IY21 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC29.69■■■□□ 2.34
DDX60Q8IY21 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC29.69■■■□□ 2.34
DDX60Q8IY21 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC29.69■■■□□ 2.34
DDX60Q8IY21 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
DDX60Q8IY21 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
DDX60Q8IY21 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC29.68■■■□□ 2.34
DDX60Q8IY21 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC29.68■■■□□ 2.34
DDX60Q8IY21 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
DDX60Q8IY21 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
DDX60Q8IY21 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
DDX60Q8IY21 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC29.67■■■□□ 2.34
DDX60Q8IY21 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC29.67■■■□□ 2.34
DDX60Q8IY21 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC29.67■■■□□ 2.34
DDX60Q8IY21 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC29.66■■■□□ 2.34
DDX60Q8IY21 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
DDX60Q8IY21 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
DDX60Q8IY21 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC29.65■■■□□ 2.34
DDX60Q8IY21 AC096887.2-201ENST00000623443 1957 ntBASIC29.65■■■□□ 2.34
DDX60Q8IY21 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
DDX60Q8IY21 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC29.65■■■□□ 2.34
DDX60Q8IY21 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
DDX60Q8IY21 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
DDX60Q8IY21 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
DDX60Q8IY21 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC29.64■■■□□ 2.34
DDX60Q8IY21 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC29.64■■■□□ 2.34
DDX60Q8IY21 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC29.64■■■□□ 2.34
DDX60Q8IY21 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC29.64■■■□□ 2.34
DDX60Q8IY21 AC092028.1-203ENST00000608262 953 ntBASIC29.64■■■□□ 2.34
DDX60Q8IY21 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC29.64■■■□□ 2.33
DDX60Q8IY21 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
DDX60Q8IY21 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC29.63■■■□□ 2.33
DDX60Q8IY21 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
DDX60Q8IY21 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC29.63■■■□□ 2.33
DDX60Q8IY21 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC29.63■■■□□ 2.33
DDX60Q8IY21 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
DDX60Q8IY21 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC29.63■■■□□ 2.33
DDX60Q8IY21 TSPY9P-201ENST00000440215 945 ntBASIC29.62■■■□□ 2.33
DDX60Q8IY21 TSPY11P-201ENST00000442607 1045 ntBASIC29.62■■■□□ 2.33
DDX60Q8IY21 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC29.62■■■□□ 2.33
DDX60Q8IY21 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC29.62■■■□□ 2.33
DDX60Q8IY21 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
DDX60Q8IY21 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
DDX60Q8IY21 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC29.61■■■□□ 2.33
DDX60Q8IY21 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC29.61■■■□□ 2.33
DDX60Q8IY21 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC29.61■■■□□ 2.33
DDX60Q8IY21 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC29.6■■■□□ 2.33
DDX60Q8IY21 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC29.6■■■□□ 2.33
DDX60Q8IY21 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms