Protein–RNA interactions for Protein: Q86UP3

ZFHX4, Zinc finger homeobox protein 4, humanhuman

Predictions only

Length 3,567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4Q86UP3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.66■■□□□ 1.22
ZFHX4Q86UP3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ZFHX4Q86UP3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ZFHX4Q86UP3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
ZFHX4Q86UP3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
ZFHX4Q86UP3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
ZFHX4Q86UP3 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
ZFHX4Q86UP3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.65■■□□□ 1.22
ZFHX4Q86UP3 AC066615.1-201ENST00000640911 628 ntBASIC22.65■■□□□ 1.22
ZFHX4Q86UP3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.65■■□□□ 1.22
ZFHX4Q86UP3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.65■■□□□ 1.22
ZFHX4Q86UP3 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC22.65■■□□□ 1.22
ZFHX4Q86UP3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.64■■□□□ 1.22
ZFHX4Q86UP3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
ZFHX4Q86UP3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
ZFHX4Q86UP3 MIR939-201ENST00000401314 82 ntBASIC22.64■■□□□ 1.21
ZFHX4Q86UP3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.64■■□□□ 1.21
ZFHX4Q86UP3 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
ZFHX4Q86UP3 AL137784.2-201ENST00000607332 1000 ntBASIC22.63■■□□□ 1.21
ZFHX4Q86UP3 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ZFHX4Q86UP3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ZFHX4Q86UP3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC22.63■■□□□ 1.21
ZFHX4Q86UP3 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ZFHX4Q86UP3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ZFHX4Q86UP3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZFHX4Q86UP3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZFHX4Q86UP3 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZFHX4Q86UP3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.62■■□□□ 1.21
ZFHX4Q86UP3 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZFHX4Q86UP3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC22.62■■□□□ 1.21
ZFHX4Q86UP3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.62■■□□□ 1.21
ZFHX4Q86UP3 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
ZFHX4Q86UP3 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
ZFHX4Q86UP3 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZFHX4Q86UP3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.61■■□□□ 1.21
ZFHX4Q86UP3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.61■■□□□ 1.21
ZFHX4Q86UP3 AP002414.2-202ENST00000590929 1450 ntBASIC22.61■■□□□ 1.21
ZFHX4Q86UP3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ZFHX4Q86UP3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ZFHX4Q86UP3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC22.61■■□□□ 1.21
ZFHX4Q86UP3 UNC93B3-201ENST00000308076 687 ntBASIC22.6■■□□□ 1.21
ZFHX4Q86UP3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.6■■□□□ 1.21
ZFHX4Q86UP3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.6■■□□□ 1.21
ZFHX4Q86UP3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.6■■□□□ 1.21
ZFHX4Q86UP3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ZFHX4Q86UP3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.6■■□□□ 1.21
ZFHX4Q86UP3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.6■■□□□ 1.21
ZFHX4Q86UP3 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
ZFHX4Q86UP3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.59■■□□□ 1.21
ZFHX4Q86UP3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.59■■□□□ 1.21
ZFHX4Q86UP3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
ZFHX4Q86UP3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
ZFHX4Q86UP3 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
ZFHX4Q86UP3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.58■■□□□ 1.21
ZFHX4Q86UP3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
ZFHX4Q86UP3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.58■■□□□ 1.2
ZFHX4Q86UP3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.58■■□□□ 1.2
ZFHX4Q86UP3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
ZFHX4Q86UP3 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.2
ZFHX4Q86UP3 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ZFHX4Q86UP3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
ZFHX4Q86UP3 EDA-201ENST00000338901 1233 ntBASIC22.57■■□□□ 1.2
ZFHX4Q86UP3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
ZFHX4Q86UP3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.57■■□□□ 1.2
ZFHX4Q86UP3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
ZFHX4Q86UP3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
ZFHX4Q86UP3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
ZFHX4Q86UP3 SLC47A1P1-202ENST00000449666 945 ntBASIC22.57■■□□□ 1.2
ZFHX4Q86UP3 AL449106.1-201ENST00000608517 1980 ntBASIC22.57■■□□□ 1.2
ZFHX4Q86UP3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
ZFHX4Q86UP3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ZFHX4Q86UP3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.56■■□□□ 1.2
ZFHX4Q86UP3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.56■■□□□ 1.2
ZFHX4Q86UP3 AC120024.1-201ENST00000562672 995 ntBASIC22.56■■□□□ 1.2
ZFHX4Q86UP3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC22.56■■□□□ 1.2
ZFHX4Q86UP3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ZFHX4Q86UP3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.55■■□□□ 1.2
ZFHX4Q86UP3 MIR6724-1-201ENST00000616420 92 ntBASIC22.55■■□□□ 1.2
ZFHX4Q86UP3 MIR6724-2-201ENST00000616483 92 ntBASIC22.55■■□□□ 1.2
ZFHX4Q86UP3 MIR6724-4-201ENST00000617390 92 ntBASIC22.55■■□□□ 1.2
ZFHX4Q86UP3 MIR6724-3-201ENST00000622482 92 ntBASIC22.55■■□□□ 1.2
ZFHX4Q86UP3 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
ZFHX4Q86UP3 AC024257.2-201ENST00000549699 147 ntBASIC22.55■■□□□ 1.2
ZFHX4Q86UP3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.55■■□□□ 1.2
ZFHX4Q86UP3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.55■■□□□ 1.2
ZFHX4Q86UP3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ZFHX4Q86UP3 AC010997.5-201ENST00000609182 354 ntBASIC22.54■■□□□ 1.2
ZFHX4Q86UP3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ZFHX4Q86UP3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
ZFHX4Q86UP3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.54■■□□□ 1.2
ZFHX4Q86UP3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.54■■□□□ 1.2
ZFHX4Q86UP3 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ZFHX4Q86UP3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
ZFHX4Q86UP3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ZFHX4Q86UP3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.53■■□□□ 1.2
ZFHX4Q86UP3 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
ZFHX4Q86UP3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.53■■□□□ 1.2
ZFHX4Q86UP3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ZFHX4Q86UP3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.52■■□□□ 1.2
ZFHX4Q86UP3 MIR4281-201ENST00000580852 62 ntBASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms