Protein–RNA interactions for Protein: Q7Z4H3

HDDC2, HD domain-containing protein 2, humanhuman

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2Q7Z4H3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HDDC2Q7Z4H3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HDDC2Q7Z4H3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HDDC2Q7Z4H3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.4■■□□□ 1.02
HDDC2Q7Z4H3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HDDC2Q7Z4H3 AC093536.1-201ENST00000569153 554 ntBASIC21.4■■□□□ 1.02
HDDC2Q7Z4H3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HDDC2Q7Z4H3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
HDDC2Q7Z4H3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HDDC2Q7Z4H3 LINC00543-201ENST00000567234 1845 ntBASIC21.39■■□□□ 1.02
HDDC2Q7Z4H3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HDDC2Q7Z4H3 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
HDDC2Q7Z4H3 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HDDC2Q7Z4H3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.39■■□□□ 1.01
HDDC2Q7Z4H3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HDDC2Q7Z4H3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
HDDC2Q7Z4H3 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HDDC2Q7Z4H3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.38■■□□□ 1.01
HDDC2Q7Z4H3 AC096887.2-201ENST00000623443 1957 ntBASIC21.38■■□□□ 1.01
HDDC2Q7Z4H3 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.38■■□□□ 1.01
HDDC2Q7Z4H3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.38■■□□□ 1.01
HDDC2Q7Z4H3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
HDDC2Q7Z4H3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HDDC2Q7Z4H3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
HDDC2Q7Z4H3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HDDC2Q7Z4H3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HDDC2Q7Z4H3 RNF126P1-201ENST00000567452 1320 ntBASIC21.37■■□□□ 1.01
HDDC2Q7Z4H3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.37■■□□□ 1.01
HDDC2Q7Z4H3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HDDC2Q7Z4H3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
HDDC2Q7Z4H3 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HDDC2Q7Z4H3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HDDC2Q7Z4H3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
HDDC2Q7Z4H3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
HDDC2Q7Z4H3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HDDC2Q7Z4H3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
HDDC2Q7Z4H3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HDDC2Q7Z4H3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HDDC2Q7Z4H3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HDDC2Q7Z4H3 KRT18P10-201ENST00000388836 1287 ntBASIC21.36■■□□□ 1.01
HDDC2Q7Z4H3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.36■■□□□ 1.01
HDDC2Q7Z4H3 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HDDC2Q7Z4H3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.36■■□□□ 1.01
HDDC2Q7Z4H3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HDDC2Q7Z4H3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HDDC2Q7Z4H3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
HDDC2Q7Z4H3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.35■■□□□ 1.01
HDDC2Q7Z4H3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HDDC2Q7Z4H3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HDDC2Q7Z4H3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HDDC2Q7Z4H3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.35■■□□□ 1.01
HDDC2Q7Z4H3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HDDC2Q7Z4H3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HDDC2Q7Z4H3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HDDC2Q7Z4H3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
HDDC2Q7Z4H3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
HDDC2Q7Z4H3 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.34■■□□□ 1.01
HDDC2Q7Z4H3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
HDDC2Q7Z4H3 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.34■■□□□ 1.01
HDDC2Q7Z4H3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
HDDC2Q7Z4H3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.33■■□□□ 1.01
HDDC2Q7Z4H3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
HDDC2Q7Z4H3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.33■■□□□ 1.01
HDDC2Q7Z4H3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HDDC2Q7Z4H3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.33■■□□□ 1.01
HDDC2Q7Z4H3 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HDDC2Q7Z4H3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.33■■□□□ 1
HDDC2Q7Z4H3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.33■■□□□ 1
HDDC2Q7Z4H3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
HDDC2Q7Z4H3 AC097639.1-201ENST00000565519 1891 ntBASIC21.32■■□□□ 1
HDDC2Q7Z4H3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.32■■□□□ 1
HDDC2Q7Z4H3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
HDDC2Q7Z4H3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HDDC2Q7Z4H3 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HDDC2Q7Z4H3 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
HDDC2Q7Z4H3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
HDDC2Q7Z4H3 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.32■■□□□ 1
HDDC2Q7Z4H3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.31■■□□□ 1
HDDC2Q7Z4H3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
HDDC2Q7Z4H3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
HDDC2Q7Z4H3 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
HDDC2Q7Z4H3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HDDC2Q7Z4H3 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
HDDC2Q7Z4H3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HDDC2Q7Z4H3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HDDC2Q7Z4H3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.31■■□□□ 1
HDDC2Q7Z4H3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
HDDC2Q7Z4H3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
HDDC2Q7Z4H3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HDDC2Q7Z4H3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HDDC2Q7Z4H3 AC020928.2-201ENST00000588717 2197 ntBASIC21.3■■□□□ 1
HDDC2Q7Z4H3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HDDC2Q7Z4H3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HDDC2Q7Z4H3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HDDC2Q7Z4H3 RAP2CP1-202ENST00000605179 643 ntBASIC21.3■■□□□ 1
HDDC2Q7Z4H3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.3■■□□□ 1
HDDC2Q7Z4H3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
HDDC2Q7Z4H3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HDDC2Q7Z4H3 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HDDC2Q7Z4H3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms