Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RNF111Q6ZNA4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
RNF111Q6ZNA4 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RNF111Q6ZNA4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23■■□□□ 1.27
RNF111Q6ZNA4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNF111Q6ZNA4 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
RNF111Q6ZNA4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.99■■□□□ 1.27
RNF111Q6ZNA4 HSD17B1P1-201ENST00000590052 955 ntBASIC22.99■■□□□ 1.27
RNF111Q6ZNA4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RNF111Q6ZNA4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RNF111Q6ZNA4 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RNF111Q6ZNA4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.98■■□□□ 1.27
RNF111Q6ZNA4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RNF111Q6ZNA4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RNF111Q6ZNA4 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC22.98■■□□□ 1.27
RNF111Q6ZNA4 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RNF111Q6ZNA4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.98■■□□□ 1.27
RNF111Q6ZNA4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.97■■□□□ 1.27
RNF111Q6ZNA4 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF111Q6ZNA4 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RNF111Q6ZNA4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF111Q6ZNA4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
RNF111Q6ZNA4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
RNF111Q6ZNA4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF111Q6ZNA4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RNF111Q6ZNA4 AC092296.2-201ENST00000589470 999 ntBASIC22.96■■□□□ 1.27
RNF111Q6ZNA4 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RNF111Q6ZNA4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
RNF111Q6ZNA4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.96■■□□□ 1.27
RNF111Q6ZNA4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
RNF111Q6ZNA4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RNF111Q6ZNA4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RNF111Q6ZNA4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.95■■□□□ 1.26
RNF111Q6ZNA4 AL157400.5-201ENST00000507624 621 ntBASIC22.95■■□□□ 1.26
RNF111Q6ZNA4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RNF111Q6ZNA4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.95■■□□□ 1.26
RNF111Q6ZNA4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.94■■□□□ 1.26
RNF111Q6ZNA4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
RNF111Q6ZNA4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC22.94■■□□□ 1.26
RNF111Q6ZNA4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
RNF111Q6ZNA4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RNF111Q6ZNA4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
RNF111Q6ZNA4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RNF111Q6ZNA4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RNF111Q6ZNA4 AC079834.2-201ENST00000609776 1949 ntBASIC22.93■■□□□ 1.26
RNF111Q6ZNA4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
RNF111Q6ZNA4 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.93■■□□□ 1.26
RNF111Q6ZNA4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
RNF111Q6ZNA4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RNF111Q6ZNA4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RNF111Q6ZNA4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RNF111Q6ZNA4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
RNF111Q6ZNA4 RNF126P1-201ENST00000567452 1320 ntBASIC22.92■■□□□ 1.26
RNF111Q6ZNA4 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.92■■□□□ 1.26
RNF111Q6ZNA4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RNF111Q6ZNA4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
RNF111Q6ZNA4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.92■■□□□ 1.26
RNF111Q6ZNA4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.92■■□□□ 1.26
RNF111Q6ZNA4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.92■■□□□ 1.26
RNF111Q6ZNA4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
RNF111Q6ZNA4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.91■■□□□ 1.26
RNF111Q6ZNA4 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RNF111Q6ZNA4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.91■■□□□ 1.26
RNF111Q6ZNA4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
RNF111Q6ZNA4 ECEL1P2-201ENST00000461596 1295 ntBASIC22.91■■□□□ 1.26
RNF111Q6ZNA4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.91■■□□□ 1.26
RNF111Q6ZNA4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.91■■□□□ 1.26
RNF111Q6ZNA4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.91■■□□□ 1.26
RNF111Q6ZNA4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
RNF111Q6ZNA4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.9■■□□□ 1.26
RNF111Q6ZNA4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RNF111Q6ZNA4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RNF111Q6ZNA4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.9■■□□□ 1.26
RNF111Q6ZNA4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
RNF111Q6ZNA4 CLDN5-201ENST00000403084 2357 ntBASIC22.89■■□□□ 1.26
RNF111Q6ZNA4 AL359504.2-201ENST00000605506 1601 ntBASIC22.89■■□□□ 1.25
RNF111Q6ZNA4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RNF111Q6ZNA4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.88■■□□□ 1.25
RNF111Q6ZNA4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RNF111Q6ZNA4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RNF111Q6ZNA4 LINC01124-201ENST00000409786 2117 ntBASIC22.88■■□□□ 1.25
RNF111Q6ZNA4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RNF111Q6ZNA4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.87■■□□□ 1.25
RNF111Q6ZNA4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF111Q6ZNA4 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF111Q6ZNA4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.87■■□□□ 1.25
RNF111Q6ZNA4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF111Q6ZNA4 LINC00543-201ENST00000567234 1845 ntBASIC22.87■■□□□ 1.25
RNF111Q6ZNA4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF111Q6ZNA4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RNF111Q6ZNA4 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.86■■□□□ 1.25
RNF111Q6ZNA4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RNF111Q6ZNA4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.86■■□□□ 1.25
RNF111Q6ZNA4 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.86■■□□□ 1.25
RNF111Q6ZNA4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RNF111Q6ZNA4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RNF111Q6ZNA4 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RNF111Q6ZNA4 RARRES2P2-201ENST00000394842 485 ntBASIC22.85■■□□□ 1.25
RNF111Q6ZNA4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RNF111Q6ZNA4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms