Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
FOXR1Q6PIV2 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
FOXR1Q6PIV2 AC110285.7-201ENST00000624417 1536 ntBASIC24.54■■□□□ 1.52
FOXR1Q6PIV2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
FOXR1Q6PIV2 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
FOXR1Q6PIV2 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
FOXR1Q6PIV2 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
FOXR1Q6PIV2 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
FOXR1Q6PIV2 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
FOXR1Q6PIV2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
FOXR1Q6PIV2 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
FOXR1Q6PIV2 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
FOXR1Q6PIV2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
FOXR1Q6PIV2 AL033527.3-201ENST00000566366 1196 ntBASIC24.52■■□□□ 1.52
FOXR1Q6PIV2 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
FOXR1Q6PIV2 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
FOXR1Q6PIV2 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
FOXR1Q6PIV2 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
FOXR1Q6PIV2 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
FOXR1Q6PIV2 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.51■■□□□ 1.51
FOXR1Q6PIV2 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.51■■□□□ 1.51
FOXR1Q6PIV2 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
FOXR1Q6PIV2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
FOXR1Q6PIV2 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.51■■□□□ 1.51
FOXR1Q6PIV2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.51■■□□□ 1.51
FOXR1Q6PIV2 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
FOXR1Q6PIV2 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.5■■□□□ 1.51
FOXR1Q6PIV2 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
FOXR1Q6PIV2 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC24.5■■□□□ 1.51
FOXR1Q6PIV2 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
FOXR1Q6PIV2 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
FOXR1Q6PIV2 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.5■■□□□ 1.51
FOXR1Q6PIV2 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
FOXR1Q6PIV2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
FOXR1Q6PIV2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC24.49■■□□□ 1.51
FOXR1Q6PIV2 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
FOXR1Q6PIV2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
FOXR1Q6PIV2 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.49■■□□□ 1.51
FOXR1Q6PIV2 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
FOXR1Q6PIV2 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC24.48■■□□□ 1.51
FOXR1Q6PIV2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.48■■□□□ 1.51
FOXR1Q6PIV2 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.48■■□□□ 1.51
FOXR1Q6PIV2 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
FOXR1Q6PIV2 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
FOXR1Q6PIV2 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
FOXR1Q6PIV2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC24.47■■□□□ 1.51
FOXR1Q6PIV2 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
FOXR1Q6PIV2 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
FOXR1Q6PIV2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.46■■□□□ 1.51
FOXR1Q6PIV2 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
FOXR1Q6PIV2 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
FOXR1Q6PIV2 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
FOXR1Q6PIV2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
FOXR1Q6PIV2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
FOXR1Q6PIV2 U85056.1-201ENST00000616429 682 ntBASIC24.45■■□□□ 1.5
FOXR1Q6PIV2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
FOXR1Q6PIV2 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
FOXR1Q6PIV2 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.45■■□□□ 1.5
FOXR1Q6PIV2 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
FOXR1Q6PIV2 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
FOXR1Q6PIV2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.44■■□□□ 1.5
FOXR1Q6PIV2 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.44■■□□□ 1.5
FOXR1Q6PIV2 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
FOXR1Q6PIV2 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
FOXR1Q6PIV2 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
FOXR1Q6PIV2 AC060814.1-201ENST00000554326 538 ntBASIC24.44■■□□□ 1.5
FOXR1Q6PIV2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
FOXR1Q6PIV2 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
FOXR1Q6PIV2 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.43■■□□□ 1.5
FOXR1Q6PIV2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC24.43■■□□□ 1.5
FOXR1Q6PIV2 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.43■■□□□ 1.5
FOXR1Q6PIV2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC24.43■■□□□ 1.5
FOXR1Q6PIV2 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
FOXR1Q6PIV2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
FOXR1Q6PIV2 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC24.43■■□□□ 1.5
FOXR1Q6PIV2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC24.43■■□□□ 1.5
FOXR1Q6PIV2 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
FOXR1Q6PIV2 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.42■■□□□ 1.5
FOXR1Q6PIV2 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
FOXR1Q6PIV2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
FOXR1Q6PIV2 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
FOXR1Q6PIV2 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC24.42■■□□□ 1.5
FOXR1Q6PIV2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.42■■□□□ 1.5
FOXR1Q6PIV2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
FOXR1Q6PIV2 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
FOXR1Q6PIV2 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
FOXR1Q6PIV2 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
FOXR1Q6PIV2 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
FOXR1Q6PIV2 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
FOXR1Q6PIV2 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
FOXR1Q6PIV2 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
FOXR1Q6PIV2 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
FOXR1Q6PIV2 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
FOXR1Q6PIV2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24.39■■□□□ 1.5
FOXR1Q6PIV2 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
FOXR1Q6PIV2 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.39■■□□□ 1.5
FOXR1Q6PIV2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
FOXR1Q6PIV2 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.49
FOXR1Q6PIV2 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
FOXR1Q6PIV2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.39■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms