Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TMEM53Q6P2H8 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
TMEM53Q6P2H8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TMEM53Q6P2H8 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TMEM53Q6P2H8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TMEM53Q6P2H8 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TMEM53Q6P2H8 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TMEM53Q6P2H8 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TMEM53Q6P2H8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.44■■□□□ 1.02
TMEM53Q6P2H8 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TMEM53Q6P2H8 AL359504.2-201ENST00000605506 1601 ntBASIC21.44■■□□□ 1.02
TMEM53Q6P2H8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM53Q6P2H8 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM53Q6P2H8 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM53Q6P2H8 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.43■■□□□ 1.02
TMEM53Q6P2H8 AC092296.2-201ENST00000589470 999 ntBASIC21.43■■□□□ 1.02
TMEM53Q6P2H8 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM53Q6P2H8 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM53Q6P2H8 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM53Q6P2H8 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM53Q6P2H8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.43■■□□□ 1.02
TMEM53Q6P2H8 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TMEM53Q6P2H8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TMEM53Q6P2H8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TMEM53Q6P2H8 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.42■■□□□ 1.02
TMEM53Q6P2H8 ECEL1P2-201ENST00000461596 1295 ntBASIC21.42■■□□□ 1.02
TMEM53Q6P2H8 AL157400.5-201ENST00000507624 621 ntBASIC21.42■■□□□ 1.02
TMEM53Q6P2H8 SLC25A24-204ENST00000569674 2357 ntBASIC21.42■■□□□ 1.02
TMEM53Q6P2H8 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.42■■□□□ 1.02
TMEM53Q6P2H8 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.41■■□□□ 1.02
TMEM53Q6P2H8 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TMEM53Q6P2H8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TMEM53Q6P2H8 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.41■■□□□ 1.02
TMEM53Q6P2H8 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.41■■□□□ 1.02
TMEM53Q6P2H8 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.41■■□□□ 1.02
TMEM53Q6P2H8 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.41■■□□□ 1.02
TMEM53Q6P2H8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
TMEM53Q6P2H8 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TMEM53Q6P2H8 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
TMEM53Q6P2H8 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TMEM53Q6P2H8 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TMEM53Q6P2H8 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TMEM53Q6P2H8 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.39■■□□□ 1.02
TMEM53Q6P2H8 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TMEM53Q6P2H8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
TMEM53Q6P2H8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.39■■□□□ 1.01
TMEM53Q6P2H8 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.39■■□□□ 1.01
TMEM53Q6P2H8 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TMEM53Q6P2H8 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
TMEM53Q6P2H8 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMEM53Q6P2H8 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
TMEM53Q6P2H8 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.38■■□□□ 1.01
TMEM53Q6P2H8 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.38■■□□□ 1.01
TMEM53Q6P2H8 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
TMEM53Q6P2H8 SMPD5-203ENST00000639008 1464 ntBASIC21.38■■□□□ 1.01
TMEM53Q6P2H8 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
TMEM53Q6P2H8 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TMEM53Q6P2H8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMEM53Q6P2H8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
TMEM53Q6P2H8 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMEM53Q6P2H8 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMEM53Q6P2H8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMEM53Q6P2H8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMEM53Q6P2H8 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMEM53Q6P2H8 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.37■■□□□ 1.01
TMEM53Q6P2H8 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.37■■□□□ 1.01
TMEM53Q6P2H8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMEM53Q6P2H8 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TMEM53Q6P2H8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TMEM53Q6P2H8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.36■■□□□ 1.01
TMEM53Q6P2H8 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TMEM53Q6P2H8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TMEM53Q6P2H8 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TMEM53Q6P2H8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TMEM53Q6P2H8 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.36■■□□□ 1.01
TMEM53Q6P2H8 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TMEM53Q6P2H8 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TMEM53Q6P2H8 RNF126P1-201ENST00000567452 1320 ntBASIC21.35■■□□□ 1.01
TMEM53Q6P2H8 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TMEM53Q6P2H8 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TMEM53Q6P2H8 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TMEM53Q6P2H8 HSD17B1P1-201ENST00000590052 955 ntBASIC21.35■■□□□ 1.01
TMEM53Q6P2H8 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TMEM53Q6P2H8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TMEM53Q6P2H8 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TMEM53Q6P2H8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.35■■□□□ 1.01
TMEM53Q6P2H8 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TMEM53Q6P2H8 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
TMEM53Q6P2H8 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TMEM53Q6P2H8 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
TMEM53Q6P2H8 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TMEM53Q6P2H8 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.34■■□□□ 1.01
TMEM53Q6P2H8 AC025884.2-201ENST00000553429 711 ntBASIC21.34■■□□□ 1.01
TMEM53Q6P2H8 MIR3960-201ENST00000583311 91 ntBASIC21.34■■□□□ 1.01
TMEM53Q6P2H8 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.34■■□□□ 1.01
TMEM53Q6P2H8 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TMEM53Q6P2H8 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.34■■□□□ 1.01
TMEM53Q6P2H8 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TMEM53Q6P2H8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TMEM53Q6P2H8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms