Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC11.85□□□□□ -0.51
LINC01554Q52M75 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01554Q52M75 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC11.85□□□□□ -0.51
LINC01554Q52M75 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01554Q52M75 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01554Q52M75 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01554Q52M75 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01554Q52M75 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01554Q52M75 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01554Q52M75 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01554Q52M75 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC11.84□□□□□ -0.51
LINC01554Q52M75 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
LINC01554Q52M75 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01554Q52M75 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01554Q52M75 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC11.84□□□□□ -0.51
LINC01554Q52M75 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC11.84□□□□□ -0.51
LINC01554Q52M75 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC11.84□□□□□ -0.51
LINC01554Q52M75 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01554Q52M75 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01554Q52M75 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
LINC01554Q52M75 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
LINC01554Q52M75 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01554Q52M75 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC11.83□□□□□ -0.51
LINC01554Q52M75 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
LINC01554Q52M75 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01554Q52M75 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
LINC01554Q52M75 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01554Q52M75 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01554Q52M75 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01554Q52M75 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01554Q52M75 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01554Q52M75 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01554Q52M75 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
LINC01554Q52M75 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01554Q52M75 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
LINC01554Q52M75 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01554Q52M75 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC01554Q52M75 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01554Q52M75 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01554Q52M75 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC01554Q52M75 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01554Q52M75 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC01554Q52M75 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01554Q52M75 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
LINC01554Q52M75 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01554Q52M75 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01554Q52M75 AP002365.1-201ENST00000603448 772 ntBASIC11.82□□□□□ -0.52
LINC01554Q52M75 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01554Q52M75 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01554Q52M75 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC01554Q52M75 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
LINC01554Q52M75 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01554Q52M75 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
LINC01554Q52M75 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC01554Q52M75 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01554Q52M75 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01554Q52M75 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01554Q52M75 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01554Q52M75 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC01554Q52M75 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01554Q52M75 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01554Q52M75 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01554Q52M75 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01554Q52M75 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC01554Q52M75 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01554Q52M75 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
LINC01554Q52M75 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
LINC01554Q52M75 EP400NL-214ENST00000641289 2402 ntBASIC11.8□□□□□ -0.52
LINC01554Q52M75 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01554Q52M75 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
LINC01554Q52M75 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01554Q52M75 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC11.8□□□□□ -0.52
LINC01554Q52M75 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01554Q52M75 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01554Q52M75 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01554Q52M75 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01554Q52M75 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01554Q52M75 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01554Q52M75 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01554Q52M75 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
LINC01554Q52M75 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01554Q52M75 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
LINC01554Q52M75 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01554Q52M75 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01554Q52M75 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01554Q52M75 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01554Q52M75 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01554Q52M75 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
LINC01554Q52M75 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01554Q52M75 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01554Q52M75 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01554Q52M75 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
LINC01554Q52M75 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01554Q52M75 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01554Q52M75 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01554Q52M75 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01554Q52M75 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
LINC01554Q52M75 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01554Q52M75 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01554Q52M75 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 205.3 ms