Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TRIM60Q495X7 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TRIM60Q495X7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
TRIM60Q495X7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TRIM60Q495X7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
TRIM60Q495X7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
TRIM60Q495X7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
TRIM60Q495X7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
TRIM60Q495X7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC26.44■■□□□ 1.82
TRIM60Q495X7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
TRIM60Q495X7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.43■■□□□ 1.82
TRIM60Q495X7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.43■■□□□ 1.82
TRIM60Q495X7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TRIM60Q495X7 PBX2P1-201ENST00000493219 1291 ntBASIC26.43■■□□□ 1.82
TRIM60Q495X7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC26.43■■□□□ 1.82
TRIM60Q495X7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC26.43■■□□□ 1.82
TRIM60Q495X7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.43■■□□□ 1.82
TRIM60Q495X7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
TRIM60Q495X7 AC011551.1-201ENST00000614101 683 ntBASIC26.42■■□□□ 1.82
TRIM60Q495X7 AC106739.1-201ENST00000617035 715 ntBASIC26.42■■□□□ 1.82
TRIM60Q495X7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
TRIM60Q495X7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
TRIM60Q495X7 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.41■■□□□ 1.82
TRIM60Q495X7 AC142381.2-201ENST00000566120 298 ntBASIC26.41■■□□□ 1.82
TRIM60Q495X7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC26.41■■□□□ 1.82
TRIM60Q495X7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
TRIM60Q495X7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
TRIM60Q495X7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
TRIM60Q495X7 AC026271.2-201ENST00000428091 497 ntBASIC26.4■■□□□ 1.82
TRIM60Q495X7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
TRIM60Q495X7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC26.4■■□□□ 1.82
TRIM60Q495X7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
TRIM60Q495X7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
TRIM60Q495X7 ABCB10P1-201ENST00000614297 2181 ntBASIC26.39■■□□□ 1.82
TRIM60Q495X7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
TRIM60Q495X7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.81
TRIM60Q495X7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
TRIM60Q495X7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
TRIM60Q495X7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
TRIM60Q495X7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TRIM60Q495X7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
TRIM60Q495X7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
TRIM60Q495X7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TRIM60Q495X7 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
TRIM60Q495X7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
TRIM60Q495X7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TRIM60Q495X7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRIM60Q495X7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
TRIM60Q495X7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
TRIM60Q495X7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRIM60Q495X7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC26.37■■□□□ 1.81
TRIM60Q495X7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
TRIM60Q495X7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC26.36■■□□□ 1.81
TRIM60Q495X7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC26.36■■□□□ 1.81
TRIM60Q495X7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM60Q495X7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
TRIM60Q495X7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
TRIM60Q495X7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM60Q495X7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TRIM60Q495X7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC26.34■■□□□ 1.81
TRIM60Q495X7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC26.34■■□□□ 1.81
TRIM60Q495X7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC26.34■■□□□ 1.81
TRIM60Q495X7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TRIM60Q495X7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TRIM60Q495X7 AC135279.3-201ENST00000610945 1311 ntBASIC26.33■■□□□ 1.81
TRIM60Q495X7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
TRIM60Q495X7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
TRIM60Q495X7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC26.32■■□□□ 1.8
TRIM60Q495X7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
TRIM60Q495X7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
TRIM60Q495X7 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
TRIM60Q495X7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM60Q495X7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.31■■□□□ 1.8
TRIM60Q495X7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM60Q495X7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM60Q495X7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC26.31■■□□□ 1.8
TRIM60Q495X7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.31■■□□□ 1.8
TRIM60Q495X7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC26.31■■□□□ 1.8
TRIM60Q495X7 AC104564.3-201ENST00000582367 638 ntBASIC26.31■■□□□ 1.8
TRIM60Q495X7 AL031432.3-201ENST00000607698 485 ntBASIC26.31■■□□□ 1.8
TRIM60Q495X7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC26.31■■□□□ 1.8
TRIM60Q495X7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC26.31■■□□□ 1.8
TRIM60Q495X7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM60Q495X7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM60Q495X7 UNC93B3-201ENST00000308076 687 ntBASIC26.3■■□□□ 1.8
TRIM60Q495X7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC26.3■■□□□ 1.8
TRIM60Q495X7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
TRIM60Q495X7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC26.3■■□□□ 1.8
TRIM60Q495X7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM60Q495X7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TRIM60Q495X7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TRIM60Q495X7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TRIM60Q495X7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.29■■□□□ 1.8
TRIM60Q495X7 SUDS3P1-201ENST00000505831 966 ntBASIC26.29■■□□□ 1.8
TRIM60Q495X7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TRIM60Q495X7 AF131216.4-201ENST00000638924 1588 ntBASIC26.29■■□□□ 1.8
TRIM60Q495X7 AC142472.1-201ENST00000612013 1741 ntBASIC26.28■■□□□ 1.8
TRIM60Q495X7 MIR5787-201ENST00000611784 55 ntBASIC26.28■■□□□ 1.8
TRIM60Q495X7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC26.28■■□□□ 1.8
TRIM60Q495X7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms