Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC11.27□□□□□ -0.618e-8■■■■□ 23
SRSF1Q07955 KIF12-203ENST00000473174 735 ntTSL 57.48□□□□□ -1.218e-8■■■■□ 23
SRSF1Q07955 WSB1-213ENST00000583193 552 ntTSL 4 BASIC11.58□□□□□ -0.568e-9■■■■□ 23
SRSF1Q07955 WSB1-203ENST00000427287 1149 ntTSL 2 BASIC11.58□□□□□ -0.568e-9■■■■□ 23
SRSF1Q07955 WSB1-205ENST00000487603 1898 ntTSL 27.75□□□□□ -1.178e-9■■■■□ 23
SRSF1Q07955 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.275e-7■■■■□ 23
SRSF1Q07955 NISCH-213ENST00000489895 5350 ntTSL 213.9□□□□□ -0.185e-7■■■■□ 23
SRSF1Q07955 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.545e-7■■■■□ 23
SRSF1Q07955 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.665e-7■■■■□ 23
SRSF1Q07955 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.735e-7■■■■□ 23
SRSF1Q07955 C2orf48-202ENST00000619640 480 ntTSL 1 (best)13.87□□□□□ -0.192e-6■■■■□ 23
SRSF1Q07955 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.7□□□□□ -0.222e-6■■■■□ 23
SRSF1Q07955 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.113e-7■■■■□ 22.9
SRSF1Q07955 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC12.47□□□□□ -0.413e-7■■■■□ 22.9
SRSF1Q07955 MKNK2-213ENST00000591601 3582 ntAPPRIS P4 TSL 1 (best) BASIC9.32□□□□□ -0.923e-7■■■■□ 22.9
SRSF1Q07955 WDR73-208ENST00000559126 2031 ntTSL 216.06■□□□□ 0.169e-7■■■■□ 22.9
SRSF1Q07955 WDR73-211ENST00000559452 1240 ntTSL 316.05■□□□□ 0.169e-7■■■■□ 22.9
SRSF1Q07955 WDR73-205ENST00000558521 997 ntTSL 315.25■□□□□ 0.039e-7■■■■□ 22.9
SRSF1Q07955 WDR73-210ENST00000559224 788 ntTSL 515.25■□□□□ 0.039e-7■■■■□ 22.9
SRSF1Q07955 WDR73-213ENST00000559994 2063 ntTSL 512.63□□□□□ -0.399e-7■■■■□ 22.9
SRSF1Q07955 WDR73-207ENST00000559015 2140 ntTSL 212.52□□□□□ -0.419e-7■■■■□ 22.9
SRSF1Q07955 WDR73-201ENST00000398528 1915 ntTSL 1 (best)11.95□□□□□ -0.59e-7■■■■□ 22.9
SRSF1Q07955 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.679e-7■■■■□ 22.9
SRSF1Q07955 WDR73-219ENST00000561329 1007 ntTSL 29.54□□□□□ -0.889e-7■■■■□ 22.9
SRSF1Q07955 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.06□□□□□ -0.164e-7■■■■□ 22.9
SRSF1Q07955 POLR3E-211ENST00000564750 2327 ntTSL 213.34□□□□□ -0.274e-7■■■■□ 22.9
SRSF1Q07955 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.07□□□□□ -0.324e-7■■■■□ 22.9
SRSF1Q07955 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC13.06□□□□□ -0.324e-7■■■■□ 22.9
SRSF1Q07955 POLR3E-208ENST00000564061 4800 ntTSL 1 (best)10□□□□□ -0.814e-7■■■■□ 22.9
SRSF1Q07955 POLR3E-219ENST00000615879 3655 ntTSL 2 BASIC9.63□□□□□ -0.874e-7■■■■□ 22.9
SRSF1Q07955 POLR3E-201ENST00000299853 3697 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.894e-7■■■■□ 22.9
SRSF1Q07955 MCM7-204ENST00000425308 1497 ntTSL 325■■□□□ 1.594e-8■■■■□ 22.8
SRSF1Q07955 MCM7-209ENST00000485286 2900 ntTSL 214.08□□□□□ -0.154e-8■■■■□ 22.8
SRSF1Q07955 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.32□□□□□ -0.284e-8■■■■□ 22.8
SRSF1Q07955 MCM7-208ENST00000467516 776 ntTSL 210.39□□□□□ -0.754e-9■■■■□ 22.8
SRSF1Q07955 MCM7-211ENST00000491245 648 ntTSL 1 (best)9.15□□□□□ -0.945e-8■■■■□ 22.8
SRSF1Q07955 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.1■□□□□ 0.653e-7■■■■□ 22.8
SRSF1Q07955 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.99■□□□□ 0.473e-7■■■■□ 22.8
SRSF1Q07955 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.393e-7■■■■□ 22.8
SRSF1Q07955 TK1-206ENST00000592126 631 ntTSL 317.24■□□□□ 0.353e-7■■■■□ 22.8
SRSF1Q07955 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.293e-7■■■■□ 22.8
SRSF1Q07955 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.79■□□□□ 0.283e-7■■■■□ 22.8
SRSF1Q07955 PDE8A-210ENST00000559086 538 ntTSL 416.34■□□□□ 0.213e-7■■■■□ 22.8
SRSF1Q07955 TK1-202ENST00000586613 631 ntTSL 315.99■□□□□ 0.153e-7■■■■□ 22.8
SRSF1Q07955 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.84■□□□□ 0.133e-7■■■■□ 22.8
SRSF1Q07955 VRK2-205ENST00000432057 1870 ntTSL 1 (best)15.52■□□□□ 0.073e-7■■■■□ 22.8
SRSF1Q07955 TCERG1-207ENST00000507175 1984 ntTSL 215.2■□□□□ 0.023e-7■■■■□ 22.8
SRSF1Q07955 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.053e-7■■■■□ 22.8
SRSF1Q07955 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.69□□□□□ -0.223e-7■■■■□ 22.8
SRSF1Q07955 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.223e-7■■■■□ 22.8
SRSF1Q07955 HAUS5-206ENST00000587439 2758 ntTSL 212.79□□□□□ -0.364e-9■■■■□ 22.8
SRSF1Q07955 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC12.63□□□□□ -0.393e-7■■■■□ 22.8
SRSF1Q07955 HAUS5-205ENST00000585968 2762 ntTSL 1 (best)12.12□□□□□ -0.474e-9■■■■□ 22.8
SRSF1Q07955 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC12.02□□□□□ -0.493e-7■■■■□ 22.8
SRSF1Q07955 LINC00511-202ENST00000457958 1696 ntTSL 1 (best) BASIC10.74□□□□□ -0.693e-7■■■■□ 22.8
SRSF1Q07955 LINC00511-214ENST00000581801 379 ntTSL 310.13□□□□□ -0.793e-7■■■■□ 22.8
SRSF1Q07955 ATAD2-201ENST00000287394 5565 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.798e-8■■■■□ 22.8
SRSF1Q07955 HAUS5-202ENST00000424522 4462 ntTSL 59.94□□□□□ -0.824e-9■■■■□ 22.8
SRSF1Q07955 LINC00511-209ENST00000580500 561 ntTSL 49.92□□□□□ -0.823e-7■■■■□ 22.8
SRSF1Q07955 ATAD2-202ENST00000517666 4995 ntTSL 59.88□□□□□ -0.838e-8■■■■□ 22.8
SRSF1Q07955 HAUS5-201ENST00000203166 4283 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.874e-9■■■■□ 22.8
SRSF1Q07955 HAUS5-203ENST00000428854 4387 ntTSL 59.32□□□□□ -0.924e-9■■■■□ 22.8
SRSF1Q07955 LINC00511-211ENST00000580948 475 ntTSL 39.07□□□□□ -0.963e-7■■■■□ 22.8
SRSF1Q07955 LINC00511-204ENST00000577828 538 ntTSL 3 BASIC9.05□□□□□ -0.963e-7■■■■□ 22.8
SRSF1Q07955 TCERG1-202ENST00000394421 3633 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.973e-7■■■■□ 22.8
SRSF1Q07955 TCERG1-210ENST00000510724 583 ntTSL 38.5□□□□□ -1.053e-7■■■■□ 22.8
SRSF1Q07955 TCERG1-201ENST00000296702 4654 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.063e-7■■■■□ 22.8
SRSF1Q07955 TCERG1-216ENST00000549332 3518 ntTSL 58.15□□□□□ -1.113e-7■■■■□ 22.8
SRSF1Q07955 EZH2-205ENST00000476773 2572 ntTSL 2 BASIC8.12□□□□□ -1.113e-7■■■■□ 22.8
SRSF1Q07955 ATAD2-204ENST00000521496 3133 ntTSL 1 (best)7.93□□□□□ -1.148e-8■■■■□ 22.8
SRSF1Q07955 ATAD2-205ENST00000521903 5143 ntTSL 1 (best) BASIC6.84□□□□□ -1.318e-8■■■■□ 22.8
SRSF1Q07955 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.423e-7■■■■□ 22.8
SRSF1Q07955 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.33□□□□□ -1.563e-7■■■■□ 22.8
SRSF1Q07955 ATAD2-203ENST00000519124 4650 ntTSL 1 (best)4.94□□□□□ -1.628e-8■■■■□ 22.8
SRSF1Q07955 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.623e-7■■■■□ 22.8
SRSF1Q07955 SREK1-201ENST00000284041 3751 ntTSL 1 (best)3.41□□□□□ -1.863e-7■■■■□ 22.8
SRSF1Q07955 SREK1-208ENST00000520580 2369 ntTSL 23.27□□□□□ -1.893e-7■■■■□ 22.8
SRSF1Q07955 SREK1-206ENST00000519259 9353 ntTSL 23.16□□□□□ -1.93e-7■■■■□ 22.8
SRSF1Q07955 ZC3H18-212ENST00000569435 694 ntAPPRIS ALT2 TSL 515.75■□□□□ 0.112e-7■■■■□ 22.8
SRSF1Q07955 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.72e-7■■■■□ 22.8
SRSF1Q07955 ZC3H18-202ENST00000452588 3211 ntTSL 2 BASIC9.77□□□□□ -0.852e-7■■■■□ 22.8
SRSF1Q07955 PPM1F-208ENST00000496143 544 ntTSL 419.71■□□□□ 0.751e-6■■■■□ 22.8
SRSF1Q07955 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.371e-6■■■■□ 22.8
SRSF1Q07955 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.471e-6■■■■□ 22.8
SRSF1Q07955 NLRP1-213ENST00000576905 555 ntTSL 412.36□□□□□ -0.435e-11■■■■□ 22.8
SRSF1Q07955 NLRP1-205ENST00000544378 5281 ntTSL 211.1□□□□□ -0.635e-11■■■■□ 22.8
SRSF1Q07955 NLRP1-202ENST00000269280 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.815e-11■■■■□ 22.8
SRSF1Q07955 NLRP1-208ENST00000571451 5444 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.845e-11■■■■□ 22.8
SRSF1Q07955 NLRP1-201ENST00000262467 5131 ntTSL 5 BASIC9.28□□□□□ -0.925e-11■■■■□ 22.8
SRSF1Q07955 NLRP1-216ENST00000617618 4788 ntAPPRIS P4 TSL 5 BASIC8.18□□□□□ -1.15e-11■■■■□ 22.8
SRSF1Q07955 NLRP1-215ENST00000613500 4494 ntTSL 5 BASIC8.13□□□□□ -1.115e-11■■■■□ 22.8
SRSF1Q07955 NLRP1-217ENST00000619223 4698 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.145e-11■■■■□ 22.8
SRSF1Q07955 NLRP1-203ENST00000345221 4656 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.145e-11■■■■□ 22.8
SRSF1Q07955 NLRP1-207ENST00000571307 4050 ntTSL 1 (best)7.26□□□□□ -1.255e-11■■■■□ 22.8
SRSF1Q07955 ARGLU1-204ENST00000472226 1336 ntTSL 26.77□□□□□ -1.326e-13■■■■□ 22.7
SRSF1Q07955 VWDE-203ENST00000452576 5936 ntTSL 1 (best)10.35□□□□□ -0.751e-7■■■■□ 22.7
SRSF1Q07955 VWDE-201ENST00000275358 5260 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.851e-7■■■■□ 22.7
SRSF1Q07955 VWDE-205ENST00000521169 4700 ntTSL 59.43□□□□□ -0.91e-7■■■■□ 22.7
SRSF1Q07955 VWDE-206ENST00000614403 4701 ntTSL 1 (best) BASIC9.43□□□□□ -0.91e-7■■■■□ 22.7
SRSF1Q07955 RECQL4-204ENST00000531875 988 ntTSL 516.23■□□□□ 0.195e-8■■■■□ 22.7
Retrieved 100 of 14,836 protein–RNA pairs in 409.6 ms