RNA–Protein interactions for RNA: ENST00000452576.6

VWDE-203, Transcript of von Willebrand factor D and EGF domains, humanhuman

TSL 1 (best)

Gene VWDE, Length 5,936 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWDE-203ENST00000452576 DCAF8L2P0C7V8 631 aa20.69■□□□□ 0.9
VWDE-203ENST00000452576 PELP1Q8IZL8 1130 aaKnown RBP19.94■□□□□ 0.78
VWDE-203ENST00000452576 SUPT5HO00267 1087 aaKnown RBP19.66■□□□□ 0.74
VWDE-203ENST00000452576 EHMT2Q96KQ7 1210 aa19.55■□□□□ 0.72
VWDE-203ENST00000452576 ERICH6Q7L0X2 663 aa19.3■□□□□ 0.68
VWDE-203ENST00000452576 APLP2Q06481 763 aa19.14■□□□□ 0.65
VWDE-203ENST00000452576 SHROOM4Q9ULL8 1493 aa19.05■□□□□ 0.64
VWDE-203ENST00000452576 CCER1Q8TC90 406 aaPredicted RBP19.04■□□□□ 0.64
VWDE-203ENST00000452576 TTBK1Q5TCY1 1321 aaPredicted RBP18.94■□□□□ 0.62
VWDE-203ENST00000452576 CENPBP07199 599 aaPredicted RBP18.87■□□□□ 0.61
VWDE-203ENST00000452576 PCGF6Q9BYE7 350 aa18.77■□□□□ 0.6
VWDE-203ENST00000452576 FAM9AQ8IZU1 332 aaPredicted RBP18.73■□□□□ 0.59
VWDE-203ENST00000452576 NEFLP07196 543 aa18.6■□□□□ 0.57
VWDE-203ENST00000452576 MYT1Q01538 1121 aa18.59■□□□□ 0.57
VWDE-203ENST00000452576 RANGAP1P46060 587 aaPredicted RBP18.57■□□□□ 0.56
VWDE-203ENST00000452576 YTHDC1Q96MU7 727 aaKnown RBP18.53■□□□□ 0.56
VWDE-203ENST00000452576 ZEB1P37275 1124 aaPredicted RBP18.46■□□□□ 0.55
VWDE-203ENST00000452576 ATP1B4Q9UN42 357 aaPredicted RBP18.45■□□□□ 0.54
VWDE-203ENST00000452576 DAXXQ9UER7 740 aaPredicted RBP18.3■□□□□ 0.52
VWDE-203ENST00000452576 TRIM41Q8WV44 630 aa18.08■□□□□ 0.49
VWDE-203ENST00000452576 UBTFP17480 764 aaKnown RBP18.08■□□□□ 0.49
VWDE-203ENST00000452576 POLR3GLQ9BT43 218 aa18■□□□□ 0.47
VWDE-203ENST00000452576 NISCHQ9Y2I1 1504 aa17.97■□□□□ 0.47
VWDE-203ENST00000452576 PPARGC1BQ86YN6 1023 aaKnown RBP17.95■□□□□ 0.46
VWDE-203ENST00000452576 CNGB1Q14028 1251 aaPredicted RBP17.88■□□□□ 0.45
VWDE-203ENST00000452576 ZNF316A6NFI3 1004 aaPredicted RBP17.85■□□□□ 0.45
VWDE-203ENST00000452576 RTL5Q5HYW3 569 aaPredicted RBP17.85■□□□□ 0.45
VWDE-203ENST00000452576 MYT1LQ9UL68 1186 aa17.83■□□□□ 0.45
VWDE-203ENST00000452576 ITGAEP38570 1179 aa17.76■□□□□ 0.43
VWDE-203ENST00000452576 CLSPNQ9HAW4 1339 aa17.75■□□□□ 0.43
VWDE-203ENST00000452576 SLC4A1APQ9BWU0 796 aaKnown RBP17.7■□□□□ 0.42
VWDE-203ENST00000452576 HRCP23327 699 aa17.67■□□□□ 0.42
VWDE-203ENST00000452576 CHIC1Q5VXU3 224 aa17.65■□□□□ 0.42
VWDE-203ENST00000452576 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.65■□□□□ 0.42
VWDE-203ENST00000452576 TRIM26Q12899 539 aaPredicted RBP17.65■□□□□ 0.42
VWDE-203ENST00000452576 HNRNPUL2Q1KMD3 747 aaKnown RBP17.65■□□□□ 0.42
VWDE-203ENST00000452576 BCANQ96GW7 911 aa17.41■□□□□ 0.38
VWDE-203ENST00000452576 DIEXFQ68CQ4 756 aaKnown RBP17.35■□□□□ 0.37
VWDE-203ENST00000452576 ZBTB47Q9UFB7 747 aaPredicted RBP17.33■□□□□ 0.36
VWDE-203ENST00000452576 BCL11AQ9H165 835 aa17.3■□□□□ 0.36
VWDE-203ENST00000452576 CDK11AQ9UQ88 783 aaPredicted RBP17.26■□□□□ 0.35
VWDE-203ENST00000452576 LOC105371045A0A1W2PR82 267 aa17.22■□□□□ 0.35
VWDE-203ENST00000452576 SLC24A1O60721 1099 aa17.19■□□□□ 0.34
VWDE-203ENST00000452576 GTF3C3Q9Y5Q9 886 aa17.18■□□□□ 0.34
VWDE-203ENST00000452576 TRIM52Q96A61 297 aa17.17■□□□□ 0.34
VWDE-203ENST00000452576 CANXP27824 592 aaKnown RBP17.16■□□□□ 0.34
VWDE-203ENST00000452576 FAM50AQ14320 339 aaKnown RBP17.15■□□□□ 0.34
VWDE-203ENST00000452576 NEUROD1Q13562 356 aa17.15■□□□□ 0.34
VWDE-203ENST00000452576 EIF5BO60841 1220 aaKnown RBP17.13■□□□□ 0.33
VWDE-203ENST00000452576 ZNF326Q5BKZ1 582 aaKnown RBP17.09■□□□□ 0.33
VWDE-203ENST00000452576 ANP32CO43423 234 aa17.09■□□□□ 0.33
VWDE-203ENST00000452576 ANP32AP39687 249 aaKnown RBP17.04■□□□□ 0.32
VWDE-203ENST00000452576 NPM2Q86SE8 214 aaKnown RBP17.04■□□□□ 0.32
VWDE-203ENST00000452576 ANP32BQ92688 251 aaKnown RBP16.99■□□□□ 0.31
VWDE-203ENST00000452576 NEFMP07197 916 aa16.94■□□□□ 0.3
VWDE-203ENST00000452576 GLIPR1L2Q4G1C9 344 aa16.89■□□□□ 0.29
VWDE-203ENST00000452576 HSP90AA1P07900 732 aaKnown RBP16.88■□□□□ 0.29
VWDE-203ENST00000452576 ARXQ96QS3 562 aa16.75■□□□□ 0.27
VWDE-203ENST00000452576 ACIN1Q9UKV3 1341 aaKnown RBP16.73■□□□□ 0.27
VWDE-203ENST00000452576 UPF2Q9HAU5 1272 aaKnown RBP16.73■□□□□ 0.27
VWDE-203ENST00000452576 FKBP8Q14318 412 aa16.69■□□□□ 0.26
VWDE-203ENST00000452576 NBR1Q14596 966 aa16.69■□□□□ 0.26
VWDE-203ENST00000452576 FBLN2P98095 1184 aa16.58■□□□□ 0.25
VWDE-203ENST00000452576 CDK11BP21127 795 aaKnown RBP16.58■□□□□ 0.24
VWDE-203ENST00000452576 ARID3CA6NKF2 412 aa16.56■□□□□ 0.24
VWDE-203ENST00000452576 SALL2Q9Y467 1007 aaPredicted RBP16.55■□□□□ 0.24
VWDE-203ENST00000452576 HNRNPUQ00839 825 aaKnown RBP eCLIP16.53■□□□□ 0.24
VWDE-203ENST00000452576 FAM9BQ8IZU0 186 aa16.52■□□□□ 0.24
VWDE-203ENST00000452576 ZNF777Q9ULD5 760 aaPredicted RBP16.5■□□□□ 0.23
VWDE-203ENST00000452576 PABPN1Q86U42 306 aaKnown RBP eCLIP16.49■□□□□ 0.23
VWDE-203ENST00000452576 CCDC136Q96JN2 1154 aa16.48■□□□□ 0.23
VWDE-203ENST00000452576 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.47■□□□□ 0.23
VWDE-203ENST00000452576 P3H3Q8IVL6 736 aa16.46■□□□□ 0.23
VWDE-203ENST00000452576 CHGAP10645 457 aaKnown RBP16.46■□□□□ 0.22
VWDE-203ENST00000452576 PLPPR3Q6T4P5 718 aa16.43■□□□□ 0.22
VWDE-203ENST00000452576 STAG3Q9UJ98 1225 aa16.42■□□□□ 0.22
VWDE-203ENST00000452576 ESF1Q9H501 851 aaKnown RBP16.41■□□□□ 0.22
VWDE-203ENST00000452576 TRIM44Q96DX7 344 aaPredicted RBP16.39■□□□□ 0.21
VWDE-203ENST00000452576 DDX10Q13206 875 aaKnown RBP16.37■□□□□ 0.21
VWDE-203ENST00000452576 TONSLQ96HA7 1378 aa16.36■□□□□ 0.21
VWDE-203ENST00000452576 TNNT2P45379 298 aaPredicted RBP16.35■□□□□ 0.21
VWDE-203ENST00000452576 NCLP19338 710 aaKnown RBP16.34■□□□□ 0.21
VWDE-203ENST00000452576 TMC1Q8TDI8 760 aa16.34■□□□□ 0.21
VWDE-203ENST00000452576 WDR43Q15061 677 aaKnown RBP eCLIP16.34■□□□□ 0.21
VWDE-203ENST00000452576 MYH16Q9H6N6 1097 aa16.34■□□□□ 0.21
VWDE-203ENST00000452576 ABCC9O60706 1549 aa16.33■□□□□ 0.21
VWDE-203ENST00000452576 IRX6P78412 446 aaPredicted RBP16.33■□□□□ 0.2
VWDE-203ENST00000452576 A0A0G2JS52 829 aa16.3■□□□□ 0.2
VWDE-203ENST00000452576 SCAF1Q9H7N4 1312 aaKnown RBP16.29■□□□□ 0.2
VWDE-203ENST00000452576 PTMAP06454 111 aaKnown RBP16.28■□□□□ 0.2
VWDE-203ENST00000452576 BECN1Q14457 450 aa16.26■□□□□ 0.19
VWDE-203ENST00000452576 TPRNQ4KMQ1 711 aa16.26■□□□□ 0.19
VWDE-203ENST00000452576 DNTTIP2Q5QJE6 756 aaKnown RBP16.26■□□□□ 0.19
VWDE-203ENST00000452576 TULP1O00294 542 aaPredicted RBP16.25■□□□□ 0.19
VWDE-203ENST00000452576 GOLGA6L22H0YM25 854 aa16.24■□□□□ 0.19
VWDE-203ENST00000452576 DDRGK1Q96HY6 314 aa16.24■□□□□ 0.19
VWDE-203ENST00000452576 MRS2Q9HD23 443 aa16.23■□□□□ 0.19
VWDE-203ENST00000452576 ZRSR1Q15695 479 aaKnown RBP16.22■□□□□ 0.19
VWDE-203ENST00000452576 ZBTB7CA1YPR0 619 aa16.2■□□□□ 0.18
VWDE-203ENST00000452576 ANP32EQ9BTT0 268 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms