RNA–Protein interactions for RNA: ENST00000435505.6

VRK2-206, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 2,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-206ENST00000435505 CHIC1Q5VXU3 224 aa15.27■□□□□ 0.03
VRK2-206ENST00000435505 AEBP2Q6ZN18 517 aaPredicted RBP14.74□□□□□ -0.05
VRK2-206ENST00000435505 PHF23Q9BUL5 403 aaPredicted RBP13.78□□□□□ -0.2
VRK2-206ENST00000435505 EHMT2Q96KQ7 1210 aa13.44□□□□□ -0.26
VRK2-206ENST00000435505 SLC24A1O60721 1099 aa13.22□□□□□ -0.29
VRK2-206ENST00000435505 PLPPR3Q6T4P5 718 aa12.82□□□□□ -0.36
VRK2-206ENST00000435505 KCNA4P22459 653 aa12.79□□□□□ -0.36
VRK2-206ENST00000435505 CSRNP3Q8WYN3 585 aa12.68□□□□□ -0.38
VRK2-206ENST00000435505 RTN4Q9NQC3 1192 aaKnown RBP12.53□□□□□ -0.4
VRK2-206ENST00000435505 ADRA2BP18089 450 aa12.35□□□□□ -0.43
VRK2-206ENST00000435505 SLC4A1APQ9BWU0 796 aaKnown RBP12.22□□□□□ -0.45
VRK2-206ENST00000435505 AMER1Q5JTC6 1135 aaPredicted RBP12.17□□□□□ -0.46
VRK2-206ENST00000435505 SENP3Q9H4L4 574 aaPredicted RBP11.96□□□□□ -0.5
VRK2-206ENST00000435505 ZBTB22O15209 634 aa11.89□□□□□ -0.51
VRK2-206ENST00000435505 PPP6R1Q9UPN7 881 aa11.85□□□□□ -0.51
VRK2-206ENST00000435505 NCBP3Q53F19 620 aaKnown RBP11.8□□□□□ -0.52
VRK2-206ENST00000435505 PRKCSHP14314 528 aaPredicted RBP11.74□□□□□ -0.53
VRK2-206ENST00000435505 PPP4R3CPQ6ZMV5 832 aa11.56□□□□□ -0.56
VRK2-206ENST00000435505 NPM3O75607 178 aaKnown RBP11.54□□□□□ -0.56
VRK2-206ENST00000435505 DAXXQ9UER7 740 aaPredicted RBP11.38□□□□□ -0.59
VRK2-206ENST00000435505 TAOK2Q9UL54 1235 aa11.36□□□□□ -0.59
VRK2-206ENST00000435505 FKBP8Q14318 412 aa11.34□□□□□ -0.59
VRK2-206ENST00000435505 PLCB2Q00722 1185 aa11.29□□□□□ -0.6
VRK2-206ENST00000435505 TIMELESSQ9UNS1 1208 aa11.24□□□□□ -0.61
VRK2-206ENST00000435505 BCANQ96GW7 911 aa11.23□□□□□ -0.61
VRK2-206ENST00000435505 FOXD4L1Q9NU39 408 aa11.21□□□□□ -0.61
VRK2-206ENST00000435505 FOXD1Q16676 465 aa11.2□□□□□ -0.62
VRK2-206ENST00000435505 TPRNQ4KMQ1 711 aa11.2□□□□□ -0.62
VRK2-206ENST00000435505 HAP1P54257 671 aaPredicted RBP11.17□□□□□ -0.62
VRK2-206ENST00000435505 TULP1O00294 542 aaPredicted RBP11.1□□□□□ -0.63
VRK2-206ENST00000435505 ARXQ96QS3 562 aa11□□□□□ -0.65
VRK2-206ENST00000435505 KDM2AQ9Y2K7 1162 aa10.9□□□□□ -0.66
VRK2-206ENST00000435505 VSIG10Q8N0Z9 540 aa10.86□□□□□ -0.67
VRK2-206ENST00000435505 CNKSR2Q8WXI2 1034 aa10.86□□□□□ -0.67
VRK2-206ENST00000435505 FBLN2P98095 1184 aa10.85□□□□□ -0.67
VRK2-206ENST00000435505 GTF3C3Q9Y5Q9 886 aa10.8□□□□□ -0.68
VRK2-206ENST00000435505 DCAF8L2P0C7V8 631 aa10.79□□□□□ -0.68
VRK2-206ENST00000435505 PIAS4Q8N2W9 510 aaPredicted RBP10.78□□□□□ -0.68
VRK2-206ENST00000435505 HOMEZQ8IX15 550 aa10.72□□□□□ -0.69
VRK2-206ENST00000435505 DNAJC5BQ9UF47 199 aa10.66□□□□□ -0.7
VRK2-206ENST00000435505 SLC4A2P04920 1241 aa10.64□□□□□ -0.71
VRK2-206ENST00000435505 TMEM132AQ24JP5 1023 aa10.58□□□□□ -0.72
VRK2-206ENST00000435505 ATXN8OSP0DMR3 200 aa10.54□□□□□ -0.72
VRK2-206ENST00000435505 PKD2Q13563 968 aa10.53□□□□□ -0.72
VRK2-206ENST00000435505 PAXIP1Q6ZW49 1069 aaPredicted RBP10.52□□□□□ -0.73
VRK2-206ENST00000435505 PODXL2Q9NZ53 605 aa10.51□□□□□ -0.73
VRK2-206ENST00000435505 CFAP44Q96MT7 982 aa10.49□□□□□ -0.73
VRK2-206ENST00000435505 NPM1P06748 294 aaKnown RBP eCLIP10.49□□□□□ -0.73
VRK2-206ENST00000435505 MAPK8IP2Q13387 824 aaPredicted RBP10.48□□□□□ -0.73
VRK2-206ENST00000435505 C14orf37Q86TY3 774 aa10.48□□□□□ -0.73
VRK2-206ENST00000435505 TSHZ2Q9NRE2 1034 aa10.48□□□□□ -0.73
VRK2-206ENST00000435505 IFNLR1Q8IU57 520 aaPredicted RBP10.43□□□□□ -0.74
VRK2-206ENST00000435505 RANGAP1P46060 587 aaPredicted RBP10.42□□□□□ -0.74
VRK2-206ENST00000435505 MYCNP04198 464 aaPredicted RBP10.41□□□□□ -0.74
VRK2-206ENST00000435505 ATF5Q9Y2D1 282 aaPredicted RBP10.41□□□□□ -0.74
VRK2-206ENST00000435505 SCAF1Q9H7N4 1312 aaKnown RBP10.4□□□□□ -0.75
VRK2-206ENST00000435505 KLHL34Q8N239 644 aa10.38□□□□□ -0.75
VRK2-206ENST00000435505 ERICH6Q7L0X2 663 aa10.38□□□□□ -0.75
VRK2-206ENST00000435505 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.38□□□□□ -0.75
VRK2-206ENST00000435505 BBXQ8WY36 941 aaPredicted RBP10.37□□□□□ -0.75
VRK2-206ENST00000435505 SUPT5HO00267 1087 aaKnown RBP10.37□□□□□ -0.75
VRK2-206ENST00000435505 PELP1Q8IZL8 1130 aaKnown RBP10.36□□□□□ -0.75
VRK2-206ENST00000435505 RNF216Q9NWF9 866 aaPredicted RBP10.35□□□□□ -0.75
VRK2-206ENST00000435505 VASPP50552 380 aaPredicted RBP10.35□□□□□ -0.75
VRK2-206ENST00000435505 NBR1Q14596 966 aa10.33□□□□□ -0.76
VRK2-206ENST00000435505 FBXO3Q9UK99 471 aa10.31□□□□□ -0.76
VRK2-206ENST00000435505 UBTFP17480 764 aaKnown RBP10.22□□□□□ -0.77
VRK2-206ENST00000435505 TRIM26Q12899 539 aaPredicted RBP10.22□□□□□ -0.77
VRK2-206ENST00000435505 SPRYD3Q8NCJ5 442 aa10.22□□□□□ -0.77
VRK2-206ENST00000435505 NPM2Q86SE8 214 aaKnown RBP10.17□□□□□ -0.78
VRK2-206ENST00000435505 DNAJC5Q9H3Z4 198 aa10.17□□□□□ -0.78
VRK2-206ENST00000435505 HRCP23327 699 aa10.16□□□□□ -0.78
VRK2-206ENST00000435505 RGL2O15211 777 aa10.13□□□□□ -0.79
VRK2-206ENST00000435505 ECM2O94769 699 aaPredicted RBP10.12□□□□□ -0.79
VRK2-206ENST00000435505 SPDYE4A6NLX3 237 aa10.12□□□□□ -0.79
VRK2-206ENST00000435505 PROM2Q8N271 834 aa10.08□□□□□ -0.8
VRK2-206ENST00000435505 MYT1Q01538 1121 aa10.06□□□□□ -0.8
VRK2-206ENST00000435505 TRHP20396 242 aaPredicted RBP10.05□□□□□ -0.8
VRK2-206ENST00000435505 HOXD11P31277 338 aaPredicted RBP10.04□□□□□ -0.8
VRK2-206ENST00000435505 APLP2Q06481 763 aa10□□□□□ -0.81
VRK2-206ENST00000435505 CHGAP10645 457 aaKnown RBP9.99□□□□□ -0.81
VRK2-206ENST00000435505 NISCHQ9Y2I1 1504 aa9.97□□□□□ -0.81
VRK2-206ENST00000435505 BRPF1P55201 1214 aaPredicted RBP9.97□□□□□ -0.81
VRK2-206ENST00000435505 PPARGC1BQ86YN6 1023 aaKnown RBP9.97□□□□□ -0.81
VRK2-206ENST00000435505 MKRN4PQ13434 485 aaPredicted RBP9.93□□□□□ -0.82
VRK2-206ENST00000435505 SPOCK2Q92563 424 aa9.89□□□□□ -0.83
VRK2-206ENST00000435505 ZNF219Q9P2Y4 722 aaPredicted RBP9.83□□□□□ -0.84
VRK2-206ENST00000435505 ARID3AQ99856 593 aa9.82□□□□□ -0.84
VRK2-206ENST00000435505 DMRT2Q9Y5R5 561 aa9.8□□□□□ -0.84
VRK2-206ENST00000435505 NKX1-1Q15270 411 aaPredicted RBP9.78□□□□□ -0.84
VRK2-206ENST00000435505 LOC105371045A0A1W2PR82 267 aa9.78□□□□□ -0.84
VRK2-206ENST00000435505 NEUROD2Q15784 382 aa9.77□□□□□ -0.85
VRK2-206ENST00000435505 LMOD2Q6P5Q4 547 aa9.76□□□□□ -0.85
VRK2-206ENST00000435505 C1orf115Q9H7X2 142 aa9.75□□□□□ -0.85
VRK2-206ENST00000435505 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.74□□□□□ -0.85
VRK2-206ENST00000435505 PCGF6Q9BYE7 350 aa9.72□□□□□ -0.85
VRK2-206ENST00000435505 SAMD1Q6SPF0 538 aaPredicted RBP9.72□□□□□ -0.85
VRK2-206ENST00000435505 HS6ST3Q8IZP7 471 aa9.71□□□□□ -0.86
VRK2-206ENST00000435505 GTPBP6O43824 516 aaPredicted RBP9.7□□□□□ -0.86
VRK2-206ENST00000435505 U3KPZ7 1027 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms