RNA–Protein interactions for RNA: ENST00000580500.5

LINC00511-209, long intergenic non-protein coding RNA 511, humanhuman

TSL 4

Gene LINC00511, Length 561 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00511-209ENST00000580500 AEBP2Q6ZN18 517 aaPredicted RBP35.93■■■■□ 3.34
LINC00511-209ENST00000580500 CHIC1Q5VXU3 224 aa34.19■■■■□ 3.06
LINC00511-209ENST00000580500 SENP3Q9H4L4 574 aaPredicted RBP30.69■■■□□ 2.5
LINC00511-209ENST00000580500 PHF23Q9BUL5 403 aaPredicted RBP30.28■■■□□ 2.44
LINC00511-209ENST00000580500 FOXD1Q16676 465 aa28.56■■■□□ 2.16
LINC00511-209ENST00000580500 PLPPR3Q6T4P5 718 aa27.35■■□□□ 1.97
LINC00511-209ENST00000580500 MSH5O43196 834 aa26.77■■□□□ 1.88
LINC00511-209ENST00000580500 PPP6R1Q9UPN7 881 aa26.72■■□□□ 1.87
LINC00511-209ENST00000580500 PIAS4Q8N2W9 510 aaPredicted RBP26.69■■□□□ 1.86
LINC00511-209ENST00000580500 ADRA2BP18089 450 aa26.62■■□□□ 1.85
LINC00511-209ENST00000580500 POTEDQ86YR6 584 aa26.03■■□□□ 1.76
LINC00511-209ENST00000580500 NISCHQ9Y2I1 1504 aa26.02■■□□□ 1.76
LINC00511-209ENST00000580500 SCAF1Q9H7N4 1312 aaKnown RBP24.45■■□□□ 1.5
LINC00511-209ENST00000580500 MAPK8IP2Q13387 824 aaPredicted RBP24.43■■□□□ 1.5
LINC00511-209ENST00000580500 DMRT2Q9Y5R5 561 aa24.33■■□□□ 1.49
LINC00511-209ENST00000580500 PPP4R3CPQ6ZMV5 832 aa23.95■■□□□ 1.42
LINC00511-209ENST00000580500 CNKSR2Q8WXI2 1034 aa23.52■■□□□ 1.36
LINC00511-209ENST00000580500 HOXD11P31277 338 aaPredicted RBP23.48■■□□□ 1.35
LINC00511-209ENST00000580500 RNF216Q9NWF9 866 aaPredicted RBP23.31■■□□□ 1.32
LINC00511-209ENST00000580500 DCAF8L1A6NGE4 600 aa23.26■■□□□ 1.31
LINC00511-209ENST00000580500 CCDC180Q9P1Z9 1646 aa23.16■■□□□ 1.3
LINC00511-209ENST00000580500 NCBP3Q53F19 620 aaKnown RBP23.07■■□□□ 1.28
LINC00511-209ENST00000580500 CACNB1Q02641 598 aaPredicted RBP22.91■■□□□ 1.26
LINC00511-209ENST00000580500 RNF39Q9H2S5 420 aa22.83■■□□□ 1.25
LINC00511-209ENST00000580500 ABCC9O60706 1549 aa22.8■■□□□ 1.24
LINC00511-209ENST00000580500 DNAJC5BQ9UF47 199 aa22.74■■□□□ 1.23
LINC00511-209ENST00000580500 NPM3O75607 178 aaKnown RBP22.69■■□□□ 1.22
LINC00511-209ENST00000580500 C1QBPQ07021 282 aaKnown RBP22.53■■□□□ 1.2
LINC00511-209ENST00000580500 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.32■■□□□ 1.16
LINC00511-209ENST00000580500 KCNA4P22459 653 aa22.26■■□□□ 1.15
LINC00511-209ENST00000580500 U3KPZ7 1027 aaPredicted RBP21.86■■□□□ 1.09
LINC00511-209ENST00000580500 RB1CC1Q8TDY2 1594 aa21.84■■□□□ 1.09
LINC00511-209ENST00000580500 DCAF8L2P0C7V8 631 aa21.79■■□□□ 1.08
LINC00511-209ENST00000580500 NACADO15069 1562 aa21.78■■□□□ 1.08
LINC00511-209ENST00000580500 SLC4A2P04920 1241 aa21.67■■□□□ 1.06
LINC00511-209ENST00000580500 ZCCHC6Q5VYS8 1495 aaKnown RBP21.64■■□□□ 1.06
LINC00511-209ENST00000580500 MYO15BQ96JP2 1530 aa21.6■■□□□ 1.05
LINC00511-209ENST00000580500 SPINK5Q9NQ38 1064 aaPredicted RBP21.51■■□□□ 1.03
LINC00511-209ENST00000580500 DCAF1Q9Y4B6 1507 aa21.49■■□□□ 1.03
LINC00511-209ENST00000580500 CAPN15O75808 1086 aa21.47■■□□□ 1.03
LINC00511-209ENST00000580500 UNC13AQ9UPW8 1703 aa21.44■■□□□ 1.02
LINC00511-209ENST00000580500 DSG3P32926 999 aa21.38■■□□□ 1.01
LINC00511-209ENST00000580500 APLP2Q06481 763 aa21.32■■□□□ 1
LINC00511-209ENST00000580500 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.31■■□□□ 1
LINC00511-209ENST00000580500 HNRNPUL2Q1KMD3 747 aaKnown RBP21.31■■□□□ 1
LINC00511-209ENST00000580500 PABPN1Q86U42 306 aaKnown RBP eCLIP21.3■■□□□ 1
LINC00511-209ENST00000580500 BICRAQ9NZM4 1560 aa21.25■□□□□ 0.99
LINC00511-209ENST00000580500 SAMD1Q6SPF0 538 aaPredicted RBP21.18■□□□□ 0.98
LINC00511-209ENST00000580500 SCRIBQ14160 1630 aa21.17■□□□□ 0.98
LINC00511-209ENST00000580500 ZNF219Q9P2Y4 722 aaPredicted RBP21.16■□□□□ 0.98
LINC00511-209ENST00000580500 TRHP20396 242 aaPredicted RBP21.13■□□□□ 0.97
LINC00511-209ENST00000580500 SLC4A1APQ9BWU0 796 aaKnown RBP21.03■□□□□ 0.96
LINC00511-209ENST00000580500 MYCNP04198 464 aaPredicted RBP21.01■□□□□ 0.95
LINC00511-209ENST00000580500 ABCB7O75027 752 aa20.95■□□□□ 0.94
LINC00511-209ENST00000580500 SHROOM4Q9ULL8 1493 aa20.91■□□□□ 0.94
LINC00511-209ENST00000580500 FOXD4L1Q9NU39 408 aa20.81■□□□□ 0.92
LINC00511-209ENST00000580500 EIF4G1Q04637 1599 aaKnown RBP20.67■□□□□ 0.9
LINC00511-209ENST00000580500 CC2D2AQ9P2K1 1620 aa20.63■□□□□ 0.89
LINC00511-209ENST00000580500 POLA2Q14181 598 aa20.6■□□□□ 0.89
LINC00511-209ENST00000580500 CECR2Q9BXF3 1484 aa20.48■□□□□ 0.87
LINC00511-209ENST00000580500 ATF5Q9Y2D1 282 aaPredicted RBP20.47■□□□□ 0.87
LINC00511-209ENST00000580500 ZBTB22O15209 634 aa20.46■□□□□ 0.87
LINC00511-209ENST00000580500 RBM42Q9BTD8 480 aaKnown RBP20.44■□□□□ 0.86
LINC00511-209ENST00000580500 POTEHQ6S545 545 aa20.41■□□□□ 0.86
LINC00511-209ENST00000580500 ZBTB12Q9Y330 459 aaPredicted RBP20.23■□□□□ 0.83
LINC00511-209ENST00000580500 ATXN8OSP0DMR3 200 aa20.22■□□□□ 0.83
LINC00511-209ENST00000580500 SMARCA4P51532 1647 aa20.22■□□□□ 0.83
LINC00511-209ENST00000580500 BAZ1AQ9NRL2 1556 aaPredicted RBP20.15■□□□□ 0.82
LINC00511-209ENST00000580500 ATAD2BQ9ULI0 1458 aa20.13■□□□□ 0.81
LINC00511-209ENST00000580500 NCAPD3P42695 1498 aa20.11■□□□□ 0.81
LINC00511-209ENST00000580500 MROH2BQ7Z745 1585 aa20.08■□□□□ 0.81
LINC00511-209ENST00000580500 SMARCA2P51531 1590 aa20.07■□□□□ 0.8
LINC00511-209ENST00000580500 PEG3Q9GZU2 1588 aa20■□□□□ 0.79
LINC00511-209ENST00000580500 HMGXB3Q12766 1538 aa20■□□□□ 0.79
LINC00511-209ENST00000580500 AKT1S1Q96B36 256 aa19.97■□□□□ 0.79
LINC00511-209ENST00000580500 BAZ1BQ9UIG0 1483 aaKnown RBP19.94■□□□□ 0.78
LINC00511-209ENST00000580500 CHRDL2Q6WN34 429 aa19.94■□□□□ 0.78
LINC00511-209ENST00000580500 OSCARQ8IYS5 282 aa19.91■□□□□ 0.78
LINC00511-209ENST00000580500 WIZO95785 1651 aa19.87■□□□□ 0.77
LINC00511-209ENST00000580500 RSF1Q96T23 1441 aaPredicted RBP19.79■□□□□ 0.76
LINC00511-209ENST00000580500 REM2Q8IYK8 340 aaPredicted RBP19.74■□□□□ 0.75
LINC00511-209ENST00000580500 NESP48681 1621 aa19.73■□□□□ 0.75
LINC00511-209ENST00000580500 FBLN2P98095 1184 aa19.71■□□□□ 0.75
LINC00511-209ENST00000580500 ERCC6Q03468 1493 aa19.61■□□□□ 0.73
LINC00511-209ENST00000580500 SPDYE2BA6NHP3 402 aa19.61■□□□□ 0.73
LINC00511-209ENST00000580500 SPDYE6P0CI01 402 aa19.61■□□□□ 0.73
LINC00511-209ENST00000580500 SPDYE2Q495Y8 402 aa19.61■□□□□ 0.73
LINC00511-209ENST00000580500 TOP2AP11388 1531 aaKnown RBP19.61■□□□□ 0.73
LINC00511-209ENST00000580500 LAMC3Q9Y6N6 1575 aa19.59■□□□□ 0.73
LINC00511-209ENST00000580500 CSRNP3Q8WYN3 585 aa19.57■□□□□ 0.72
LINC00511-209ENST00000580500 MKRN4PQ13434 485 aaPredicted RBP19.55■□□□□ 0.72
LINC00511-209ENST00000580500 CADPSQ9ULU8 1353 aa19.53■□□□□ 0.72
LINC00511-209ENST00000580500 PITPNM1O00562 1244 aa19.51■□□□□ 0.71
LINC00511-209ENST00000580500 KIF21AQ7Z4S6 1674 aa19.49■□□□□ 0.71
LINC00511-209ENST00000580500 PIP4P2Q8N4L2 257 aa19.46■□□□□ 0.71
LINC00511-209ENST00000580500 PDS5BQ9NTI5 1447 aa19.45■□□□□ 0.7
LINC00511-209ENST00000580500 CUX2O14529 1486 aa19.43■□□□□ 0.7
LINC00511-209ENST00000580500 THOC2Q8NI27 1593 aaKnown RBP19.43■□□□□ 0.7
LINC00511-209ENST00000580500 CCDC88BA6NC98 1476 aa19.41■□□□□ 0.7
LINC00511-209ENST00000580500 CFTRP13569 1480 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 165.2 ms