RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-208ENST00000520580 CHIC1Q5VXU3 224 aa11.96□□□□□ -0.5
SREK1-208ENST00000520580 AEBP2Q6ZN18 517 aaPredicted RBP11.75□□□□□ -0.53
SREK1-208ENST00000520580 PHF23Q9BUL5 403 aaPredicted RBP10.66□□□□□ -0.7
SREK1-208ENST00000520580 PLPPR3Q6T4P5 718 aa9.97□□□□□ -0.81
SREK1-208ENST00000520580 POTEDQ86YR6 584 aa9.87□□□□□ -0.83
SREK1-208ENST00000520580 SENP3Q9H4L4 574 aaPredicted RBP9.76□□□□□ -0.85
SREK1-208ENST00000520580 EHMT2Q96KQ7 1210 aa9.63□□□□□ -0.87
SREK1-208ENST00000520580 ADRA2BP18089 450 aa9.47□□□□□ -0.89
SREK1-208ENST00000520580 KCNA4P22459 653 aa9.45□□□□□ -0.9
SREK1-208ENST00000520580 PPP6R1Q9UPN7 881 aa9.26□□□□□ -0.93
SREK1-208ENST00000520580 CSRNP3Q8WYN3 585 aa9.13□□□□□ -0.95
SREK1-208ENST00000520580 FOXD1Q16676 465 aa9.07□□□□□ -0.96
SREK1-208ENST00000520580 SLC4A1APQ9BWU0 796 aaKnown RBP9.06□□□□□ -0.96
SREK1-208ENST00000520580 PPP4R3CPQ6ZMV5 832 aa8.9□□□□□ -0.98
SREK1-208ENST00000520580 NCBP3Q53F19 620 aaKnown RBP8.77□□□□□ -1.01
SREK1-208ENST00000520580 NPM3O75607 178 aaKnown RBP8.74□□□□□ -1.01
SREK1-208ENST00000520580 ZBTB22O15209 634 aa8.72□□□□□ -1.01
SREK1-208ENST00000520580 PIAS4Q8N2W9 510 aaPredicted RBP8.72□□□□□ -1.01
SREK1-208ENST00000520580 SLC24A1O60721 1099 aa8.7□□□□□ -1.02
SREK1-208ENST00000520580 RTN4Q9NQC3 1192 aaKnown RBP8.61□□□□□ -1.03
SREK1-208ENST00000520580 AMER1Q5JTC6 1135 aaPredicted RBP8.47□□□□□ -1.05
SREK1-208ENST00000520580 CNKSR2Q8WXI2 1034 aa8.47□□□□□ -1.05
SREK1-208ENST00000520580 FOXD4L1Q9NU39 408 aa8.43□□□□□ -1.06
SREK1-208ENST00000520580 SCAF1Q9H7N4 1312 aaKnown RBP8.33□□□□□ -1.08
SREK1-208ENST00000520580 MAPK8IP2Q13387 824 aaPredicted RBP8.27□□□□□ -1.09
SREK1-208ENST00000520580 FKBP8Q14318 412 aa8.25□□□□□ -1.09
SREK1-208ENST00000520580 MSH5O43196 834 aa8.18□□□□□ -1.1
SREK1-208ENST00000520580 DNAJC5BQ9UF47 199 aa8.17□□□□□ -1.1
SREK1-208ENST00000520580 RNF216Q9NWF9 866 aaPredicted RBP8.14□□□□□ -1.11
SREK1-208ENST00000520580 SLC4A2P04920 1241 aa8.11□□□□□ -1.11
SREK1-208ENST00000520580 MYCNP04198 464 aaPredicted RBP7.99□□□□□ -1.13
SREK1-208ENST00000520580 ATXN8OSP0DMR3 200 aa7.99□□□□□ -1.13
SREK1-208ENST00000520580 HOXD11P31277 338 aaPredicted RBP7.94□□□□□ -1.14
SREK1-208ENST00000520580 DMRT2Q9Y5R5 561 aa7.89□□□□□ -1.15
SREK1-208ENST00000520580 ATF5Q9Y2D1 282 aaPredicted RBP7.87□□□□□ -1.15
SREK1-208ENST00000520580 PLCB2Q00722 1185 aa7.84□□□□□ -1.15
SREK1-208ENST00000520580 PRKCSHP14314 528 aaPredicted RBP7.81□□□□□ -1.16
SREK1-208ENST00000520580 HAP1P54257 671 aaPredicted RBP7.79□□□□□ -1.16
SREK1-208ENST00000520580 DCAF8L2P0C7V8 631 aa7.77□□□□□ -1.17
SREK1-208ENST00000520580 BCANQ96GW7 911 aa7.69□□□□□ -1.18
SREK1-208ENST00000520580 DCAF8L1A6NGE4 600 aa7.68□□□□□ -1.18
SREK1-208ENST00000520580 FBXO3Q9UK99 471 aa7.67□□□□□ -1.18
SREK1-208ENST00000520580 TAOK2Q9UL54 1235 aa7.66□□□□□ -1.18
SREK1-208ENST00000520580 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.66□□□□□ -1.182e-7■■■□□ 16.1
SREK1-208ENST00000520580 SAMD1Q6SPF0 538 aaPredicted RBP7.62□□□□□ -1.19
SREK1-208ENST00000520580 SPDYE4A6NLX3 237 aa7.61□□□□□ -1.19
SREK1-208ENST00000520580 VASPP50552 380 aaPredicted RBP7.61□□□□□ -1.19
SREK1-208ENST00000520580 U3KPZ7 1027 aaPredicted RBP7.6□□□□□ -1.19
SREK1-208ENST00000520580 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.6□□□□□ -1.19
SREK1-208ENST00000520580 HNRNPUL2Q1KMD3 747 aaKnown RBP7.6□□□□□ -1.19
SREK1-208ENST00000520580 IFNLR1Q8IU57 520 aaPredicted RBP7.6□□□□□ -1.19
SREK1-208ENST00000520580 TPRNQ4KMQ1 711 aa7.59□□□□□ -1.2
SREK1-208ENST00000520580 ZNF219Q9P2Y4 722 aaPredicted RBP7.57□□□□□ -1.2
SREK1-208ENST00000520580 VSIG10Q8N0Z9 540 aa7.56□□□□□ -1.2
SREK1-208ENST00000520580 PKD2Q13563 968 aa7.56□□□□□ -1.2
SREK1-208ENST00000520580 FBLN2P98095 1184 aa7.54□□□□□ -1.2
SREK1-208ENST00000520580 KDM2AQ9Y2K7 1162 aa7.54□□□□□ -1.2
SREK1-208ENST00000520580 MKRN4PQ13434 485 aaPredicted RBP7.51□□□□□ -1.21
SREK1-208ENST00000520580 CFAP44Q96MT7 982 aa7.48□□□□□ -1.21
SREK1-208ENST00000520580 PAXIP1Q6ZW49 1069 aaPredicted RBP7.48□□□□□ -1.21
SREK1-208ENST00000520580 PROM2Q8N271 834 aa7.47□□□□□ -1.21
SREK1-208ENST00000520580 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.46□□□□□ -1.22
SREK1-208ENST00000520580 CACNB1Q02641 598 aaPredicted RBP7.45□□□□□ -1.22
SREK1-208ENST00000520580 NPM1P06748 294 aaKnown RBP eCLIP7.45□□□□□ -1.22
SREK1-208ENST00000520580 BBXQ8WY36 941 aaPredicted RBP7.41□□□□□ -1.22
SREK1-208ENST00000520580 ECM2O94769 699 aaPredicted RBP7.4□□□□□ -1.22
SREK1-208ENST00000520580 KLHL34Q8N239 644 aa7.39□□□□□ -1.23
SREK1-208ENST00000520580 TSHZ2Q9NRE2 1034 aa7.37□□□□□ -1.23
SREK1-208ENST00000520580 RGL2O15211 777 aa7.34□□□□□ -1.23
SREK1-208ENST00000520580 TRHP20396 242 aaPredicted RBP7.33□□□□□ -1.24
SREK1-208ENST00000520580 TIMELESSQ9UNS1 1208 aa7.33□□□□□ -1.24
SREK1-208ENST00000520580 SPRYD3Q8NCJ5 442 aa7.33□□□□□ -1.24
SREK1-208ENST00000520580 SPOCK2Q92563 424 aa7.33□□□□□ -1.24
SREK1-208ENST00000520580 APLP2Q06481 763 aa7.32□□□□□ -1.24
SREK1-208ENST00000520580 POLA2Q14181 598 aa7.32□□□□□ -1.24
SREK1-208ENST00000520580 TULP1O00294 542 aaPredicted RBP7.31□□□□□ -1.24
SREK1-208ENST00000520580 POTEHQ6S545 545 aa7.3□□□□□ -1.24
SREK1-208ENST00000520580 SPINK5Q9NQ38 1064 aaPredicted RBP7.27□□□□□ -1.24
SREK1-208ENST00000520580 CHGAP10645 457 aaKnown RBP7.27□□□□□ -1.25
SREK1-208ENST00000520580 NBR1Q14596 966 aa7.27□□□□□ -1.25
SREK1-208ENST00000520580 PLCD3Q8N3E9 789 aa7.24□□□□□ -1.25
SREK1-208ENST00000520580 GTF3C3Q9Y5Q9 886 aa7.21□□□□□ -1.26
SREK1-208ENST00000520580 CIZ1Q9ULV3 898 aaPredicted RBP7.2□□□□□ -1.26
SREK1-208ENST00000520580 CAPN15O75808 1086 aa7.19□□□□□ -1.26
SREK1-208ENST00000520580 MIER1Q8N108 512 aa7.18□□□□□ -1.26
SREK1-208ENST00000520580 ABCB7O75027 752 aa7.16□□□□□ -1.26
SREK1-208ENST00000520580 ZNF692Q9BU19 519 aaPredicted RBP7.14□□□□□ -1.27
SREK1-208ENST00000520580 DNAJC5Q9H3Z4 198 aa7.13□□□□□ -1.27
SREK1-208ENST00000520580 STAG3Q9UJ98 1225 aa7.13□□□□□ -1.27
SREK1-208ENST00000520580 ARXQ96QS3 562 aa7.09□□□□□ -1.28
SREK1-208ENST00000520580 HS6ST3Q8IZP7 471 aa7.08□□□□□ -1.28
SREK1-208ENST00000520580 DAXXQ9UER7 740 aaPredicted RBP7.08□□□□□ -1.28
SREK1-208ENST00000520580 ZBTB12Q9Y330 459 aaPredicted RBP7.08□□□□□ -1.28
SREK1-208ENST00000520580 PABPN1Q86U42 306 aaKnown RBP eCLIP7.08□□□□□ -1.28
SREK1-208ENST00000520580 RNF25Q96BH1 459 aaPredicted RBP7.07□□□□□ -1.28
SREK1-208ENST00000520580 OSCARQ8IYS5 282 aa7.06□□□□□ -1.28
SREK1-208ENST00000520580 NKX1-1Q15270 411 aaPredicted RBP7.06□□□□□ -1.28
SREK1-208ENST00000520580 TMEM132AQ24JP5 1023 aa7.05□□□□□ -1.28
SREK1-208ENST00000520580 PLEKHG5O94827 1062 aa7.02□□□□□ -1.29
SREK1-208ENST00000520580 C14orf37Q86TY3 774 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms