RNA–Protein interactions for RNA: ENST00000284041.7

SREK1-201, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 3,751 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-201ENST00000284041 AEBP2Q6ZN18 517 aaPredicted RBP12.6□□□□□ -0.39
SREK1-201ENST00000284041 CHIC1Q5VXU3 224 aa12.49□□□□□ -0.41
SREK1-201ENST00000284041 PHF23Q9BUL5 403 aaPredicted RBP11.51□□□□□ -0.57
SREK1-201ENST00000284041 ADRA2BP18089 450 aa10.24□□□□□ -0.77
SREK1-201ENST00000284041 EHMT2Q96KQ7 1210 aa10.23□□□□□ -0.77
SREK1-201ENST00000284041 PLPPR3Q6T4P5 718 aa10.22□□□□□ -0.77
SREK1-201ENST00000284041 KCNA4P22459 653 aa10.15□□□□□ -0.79
SREK1-201ENST00000284041 PPP6R1Q9UPN7 881 aa9.99□□□□□ -0.81
SREK1-201ENST00000284041 CSRNP3Q8WYN3 585 aa9.89□□□□□ -0.83
SREK1-201ENST00000284041 SENP3Q9H4L4 574 aaPredicted RBP9.87□□□□□ -0.83
SREK1-201ENST00000284041 ZBTB22O15209 634 aa9.64□□□□□ -0.87
SREK1-201ENST00000284041 FOXD1Q16676 465 aa9.53□□□□□ -0.88
SREK1-201ENST00000284041 SLC4A1APQ9BWU0 796 aaKnown RBP9.42□□□□□ -0.9
SREK1-201ENST00000284041 RTN4Q9NQC3 1192 aaKnown RBP9.4□□□□□ -0.9
SREK1-201ENST00000284041 SLC24A1O60721 1099 aa9.35□□□□□ -0.91
SREK1-201ENST00000284041 PPP4R3CPQ6ZMV5 832 aa9.27□□□□□ -0.93
SREK1-201ENST00000284041 NPM3O75607 178 aaKnown RBP9.26□□□□□ -0.93
SREK1-201ENST00000284041 PIAS4Q8N2W9 510 aaPredicted RBP8.93□□□□□ -0.98
SREK1-201ENST00000284041 MAPK8IP2Q13387 824 aaPredicted RBP8.86□□□□□ -0.99
SREK1-201ENST00000284041 AMER1Q5JTC6 1135 aaPredicted RBP8.79□□□□□ -1
SREK1-201ENST00000284041 SLC4A2P04920 1241 aa8.75□□□□□ -1.01
SREK1-201ENST00000284041 FOXD4L1Q9NU39 408 aa8.74□□□□□ -1.01
SREK1-201ENST00000284041 NCBP3Q53F19 620 aaKnown RBP8.73□□□□□ -1.01
SREK1-201ENST00000284041 CNKSR2Q8WXI2 1034 aa8.68□□□□□ -1.02
SREK1-201ENST00000284041 PRKCSHP14314 528 aaPredicted RBP8.67□□□□□ -1.02
SREK1-201ENST00000284041 FKBP8Q14318 412 aa8.66□□□□□ -1.02
SREK1-201ENST00000284041 ATF5Q9Y2D1 282 aaPredicted RBP8.6□□□□□ -1.03
SREK1-201ENST00000284041 DNAJC5BQ9UF47 199 aa8.6□□□□□ -1.03
SREK1-201ENST00000284041 RNF216Q9NWF9 866 aaPredicted RBP8.39□□□□□ -1.07
SREK1-201ENST00000284041 PLCB2Q00722 1185 aa8.34□□□□□ -1.08
SREK1-201ENST00000284041 KDM2AQ9Y2K7 1162 aa8.3□□□□□ -1.08
SREK1-201ENST00000284041 HOXD11P31277 338 aaPredicted RBP8.29□□□□□ -1.08
SREK1-201ENST00000284041 FBLN2P98095 1184 aa8.27□□□□□ -1.08
SREK1-201ENST00000284041 TAOK2Q9UL54 1235 aa8.24□□□□□ -1.09
SREK1-201ENST00000284041 PKD2Q13563 968 aa8.2□□□□□ -1.1
SREK1-201ENST00000284041 MYCNP04198 464 aaPredicted RBP8.18□□□□□ -1.1
SREK1-201ENST00000284041 IFNLR1Q8IU57 520 aaPredicted RBP8.18□□□□□ -1.1
SREK1-201ENST00000284041 SCAF1Q9H7N4 1312 aaKnown RBP8.17□□□□□ -1.1
SREK1-201ENST00000284041 NPM1P06748 294 aaKnown RBP eCLIP8.17□□□□□ -1.1
SREK1-201ENST00000284041 ATXN8OSP0DMR3 200 aa8.16□□□□□ -1.1
SREK1-201ENST00000284041 DMRT2Q9Y5R5 561 aa8.16□□□□□ -1.1
SREK1-201ENST00000284041 MKRN4PQ13434 485 aaPredicted RBP8.14□□□□□ -1.11
SREK1-201ENST00000284041 TIMELESSQ9UNS1 1208 aa8.13□□□□□ -1.11
SREK1-201ENST00000284041 HAP1P54257 671 aaPredicted RBP8.11□□□□□ -1.11
SREK1-201ENST00000284041 TPRNQ4KMQ1 711 aa8.1□□□□□ -1.11
SREK1-201ENST00000284041 PROM2Q8N271 834 aa8.05□□□□□ -1.12
SREK1-201ENST00000284041 U3KPZ7 1027 aaPredicted RBP8.02□□□□□ -1.12
SREK1-201ENST00000284041 BCANQ96GW7 911 aa7.96□□□□□ -1.14
SREK1-201ENST00000284041 MSH5O43196 834 aa7.96□□□□□ -1.14
SREK1-201ENST00000284041 VASPP50552 380 aaPredicted RBP7.95□□□□□ -1.14
SREK1-201ENST00000284041 TSHZ2Q9NRE2 1034 aa7.92□□□□□ -1.14
SREK1-201ENST00000284041 TULP1O00294 542 aaPredicted RBP7.89□□□□□ -1.15
SREK1-201ENST00000284041 RGL2O15211 777 aa7.88□□□□□ -1.15
SREK1-201ENST00000284041 SPDYE4A6NLX3 237 aa7.87□□□□□ -1.15
SREK1-201ENST00000284041 VSIG10Q8N0Z9 540 aa7.86□□□□□ -1.15
SREK1-201ENST00000284041 DCAF8L2P0C7V8 631 aa7.85□□□□□ -1.15
SREK1-201ENST00000284041 ZNF219Q9P2Y4 722 aaPredicted RBP7.85□□□□□ -1.15
SREK1-201ENST00000284041 PAXIP1Q6ZW49 1069 aaPredicted RBP7.81□□□□□ -1.16
SREK1-201ENST00000284041 CFAP44Q96MT7 982 aa7.77□□□□□ -1.17
SREK1-201ENST00000284041 TRHP20396 242 aaPredicted RBP7.76□□□□□ -1.17
SREK1-201ENST00000284041 DNAJC5Q9H3Z4 198 aa7.75□□□□□ -1.17
SREK1-201ENST00000284041 RNF25Q96BH1 459 aaPredicted RBP7.73□□□□□ -1.17
SREK1-201ENST00000284041 NKX1-1Q15270 411 aaPredicted RBP7.72□□□□□ -1.17
SREK1-201ENST00000284041 SPINK5Q9NQ38 1064 aaPredicted RBP7.72□□□□□ -1.17
SREK1-201ENST00000284041 BBXQ8WY36 941 aaPredicted RBP7.69□□□□□ -1.18
SREK1-201ENST00000284041 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.67□□□□□ -1.182e-8■■□□□ 13.9
SREK1-201ENST00000284041 FBXO3Q9UK99 471 aa7.66□□□□□ -1.18
SREK1-201ENST00000284041 DCAF8L1A6NGE4 600 aa7.66□□□□□ -1.18
SREK1-201ENST00000284041 GTF3C3Q9Y5Q9 886 aa7.65□□□□□ -1.18
SREK1-201ENST00000284041 ECM2O94769 699 aaPredicted RBP7.62□□□□□ -1.19
SREK1-201ENST00000284041 SAMD1Q6SPF0 538 aaPredicted RBP7.61□□□□□ -1.19
SREK1-201ENST00000284041 DAXXQ9UER7 740 aaPredicted RBP7.6□□□□□ -1.19
SREK1-201ENST00000284041 TMEM132AQ24JP5 1023 aa7.58□□□□□ -1.2
SREK1-201ENST00000284041 POLA2Q14181 598 aa7.57□□□□□ -1.2
SREK1-201ENST00000284041 CHGAP10645 457 aaKnown RBP7.54□□□□□ -1.2
SREK1-201ENST00000284041 SPRYD3Q8NCJ5 442 aa7.53□□□□□ -1.2
SREK1-201ENST00000284041 GTPBP6O43824 516 aaPredicted RBP7.5□□□□□ -1.21
SREK1-201ENST00000284041 SPOCK2Q92563 424 aa7.48□□□□□ -1.21
SREK1-201ENST00000284041 ARXQ96QS3 562 aa7.46□□□□□ -1.22
SREK1-201ENST00000284041 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.46□□□□□ -1.22
SREK1-201ENST00000284041 CADPS2Q86UW7 1296 aa7.45□□□□□ -1.22
SREK1-201ENST00000284041 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.44□□□□□ -1.22
SREK1-201ENST00000284041 HNRNPUL2Q1KMD3 747 aaKnown RBP7.44□□□□□ -1.22
SREK1-201ENST00000284041 BRPF1P55201 1214 aaPredicted RBP7.43□□□□□ -1.22
SREK1-201ENST00000284041 ABCB7O75027 752 aa7.42□□□□□ -1.22
SREK1-201ENST00000284041 SUPT5HO00267 1087 aaKnown RBP7.42□□□□□ -1.22
SREK1-201ENST00000284041 UBTFP17480 764 aaKnown RBP7.41□□□□□ -1.22
SREK1-201ENST00000284041 HS6ST3Q8IZP7 471 aa7.41□□□□□ -1.22
SREK1-201ENST00000284041 OSCARQ8IYS5 282 aa7.39□□□□□ -1.23
SREK1-201ENST00000284041 KLHL34Q8N239 644 aa7.39□□□□□ -1.23
SREK1-201ENST00000284041 KCNV2Q8TDN2 545 aa7.37□□□□□ -1.23
SREK1-201ENST00000284041 HRCP23327 699 aa7.36□□□□□ -1.23
SREK1-201ENST00000284041 NBR1Q14596 966 aa7.34□□□□□ -1.23
SREK1-201ENST00000284041 SSUH2Q9Y2M2 353 aa7.34□□□□□ -1.24
SREK1-201ENST00000284041 C1orf115Q9H7X2 142 aa7.33□□□□□ -1.24
SREK1-201ENST00000284041 CIZ1Q9ULV3 898 aaPredicted RBP7.32□□□□□ -1.24
SREK1-201ENST00000284041 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.32□□□□□ -1.24
SREK1-201ENST00000284041 NUBP1P53384 320 aa7.29□□□□□ -1.24
SREK1-201ENST00000284041 TRIM26Q12899 539 aaPredicted RBP7.29□□□□□ -1.24
SREK1-201ENST00000284041 PABPN1Q86U42 306 aaKnown RBP eCLIP7.29□□□□□ -1.242e-9■□□□□ 8.9
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms