Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CFHR3Q02985 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC18.62■□□□□ 0.57
CFHR3Q02985 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CFHR3Q02985 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CFHR3Q02985 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CFHR3Q02985 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CFHR3Q02985 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CFHR3Q02985 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CFHR3Q02985 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.61■□□□□ 0.57
CFHR3Q02985 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CFHR3Q02985 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.61■□□□□ 0.57
CFHR3Q02985 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
CFHR3Q02985 AC097639.1-201ENST00000565519 1891 ntBASIC18.6■□□□□ 0.57
CFHR3Q02985 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CFHR3Q02985 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CFHR3Q02985 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CFHR3Q02985 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CFHR3Q02985 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
CFHR3Q02985 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CFHR3Q02985 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CFHR3Q02985 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC18.6■□□□□ 0.57
CFHR3Q02985 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.59■□□□□ 0.57
CFHR3Q02985 KRT8P33-201ENST00000508125 1423 ntBASIC18.59■□□□□ 0.57
CFHR3Q02985 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CFHR3Q02985 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.59■□□□□ 0.57
CFHR3Q02985 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CFHR3Q02985 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CFHR3Q02985 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CFHR3Q02985 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.59■□□□□ 0.57
CFHR3Q02985 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
CFHR3Q02985 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CFHR3Q02985 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CFHR3Q02985 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CFHR3Q02985 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CFHR3Q02985 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CFHR3Q02985 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CFHR3Q02985 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.58■□□□□ 0.56
CFHR3Q02985 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CFHR3Q02985 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CFHR3Q02985 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.57■□□□□ 0.56
CFHR3Q02985 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CFHR3Q02985 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.57■□□□□ 0.56
CFHR3Q02985 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CFHR3Q02985 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CFHR3Q02985 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CFHR3Q02985 YBX1P4-201ENST00000392794 808 ntBASIC18.57■□□□□ 0.56
CFHR3Q02985 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CFHR3Q02985 AC022616.5-201ENST00000518796 181 ntBASIC18.57■□□□□ 0.56
CFHR3Q02985 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.57■□□□□ 0.56
CFHR3Q02985 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CFHR3Q02985 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CFHR3Q02985 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.57■□□□□ 0.56
CFHR3Q02985 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CFHR3Q02985 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CFHR3Q02985 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CFHR3Q02985 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CFHR3Q02985 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
CFHR3Q02985 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CFHR3Q02985 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.55■□□□□ 0.56
CFHR3Q02985 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.55■□□□□ 0.56
CFHR3Q02985 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.55■□□□□ 0.56
CFHR3Q02985 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CFHR3Q02985 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.55■□□□□ 0.56
CFHR3Q02985 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.54■□□□□ 0.56
CFHR3Q02985 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CFHR3Q02985 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CFHR3Q02985 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CFHR3Q02985 AL592295.1-201ENST00000400984 884 ntBASIC18.54■□□□□ 0.56
CFHR3Q02985 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.54■□□□□ 0.56
CFHR3Q02985 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CFHR3Q02985 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.54■□□□□ 0.56
CFHR3Q02985 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
CFHR3Q02985 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.54■□□□□ 0.56
CFHR3Q02985 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.54■□□□□ 0.56
CFHR3Q02985 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CFHR3Q02985 CREM-210ENST00000374721 2020 ntTSL 5 BASIC18.53■□□□□ 0.56
CFHR3Q02985 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CFHR3Q02985 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CFHR3Q02985 AC103724.3-201ENST00000564481 992 ntBASIC18.53■□□□□ 0.56
CFHR3Q02985 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CFHR3Q02985 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.53■□□□□ 0.56
CFHR3Q02985 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CFHR3Q02985 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CFHR3Q02985 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CFHR3Q02985 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CFHR3Q02985 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.52■□□□□ 0.56
CFHR3Q02985 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CFHR3Q02985 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CFHR3Q02985 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CFHR3Q02985 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CFHR3Q02985 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CFHR3Q02985 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CFHR3Q02985 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CFHR3Q02985 FOXO3B-201ENST00000395675 1928 ntBASIC18.51■□□□□ 0.55
CFHR3Q02985 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CFHR3Q02985 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CFHR3Q02985 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CFHR3Q02985 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.51■□□□□ 0.55
CFHR3Q02985 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.51■□□□□ 0.55
CFHR3Q02985 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms