Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SEC61A1P61619 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.55■□□□□ 0.88
SEC61A1P61619 AC007029.1-201ENST00000604183 313 ntBASIC20.55■□□□□ 0.88
SEC61A1P61619 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SEC61A1P61619 AC142472.1-201ENST00000612013 1741 ntBASIC20.55■□□□□ 0.88
SEC61A1P61619 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SEC61A1P61619 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SEC61A1P61619 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.55■□□□□ 0.88
SEC61A1P61619 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.54■□□□□ 0.88
SEC61A1P61619 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.54■□□□□ 0.88
SEC61A1P61619 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SEC61A1P61619 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SEC61A1P61619 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SEC61A1P61619 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SEC61A1P61619 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.54■□□□□ 0.88
SEC61A1P61619 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SEC61A1P61619 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.54■□□□□ 0.88
SEC61A1P61619 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SEC61A1P61619 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SEC61A1P61619 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SEC61A1P61619 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.53■□□□□ 0.88
SEC61A1P61619 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
SEC61A1P61619 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SEC61A1P61619 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SEC61A1P61619 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SEC61A1P61619 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SEC61A1P61619 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.52■□□□□ 0.88
SEC61A1P61619 AC025884.2-201ENST00000553429 711 ntBASIC20.52■□□□□ 0.88
SEC61A1P61619 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SEC61A1P61619 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SEC61A1P61619 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SEC61A1P61619 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SEC61A1P61619 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SEC61A1P61619 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SEC61A1P61619 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SEC61A1P61619 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SEC61A1P61619 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.51■□□□□ 0.87
SEC61A1P61619 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SEC61A1P61619 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.51■□□□□ 0.87
SEC61A1P61619 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SEC61A1P61619 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SEC61A1P61619 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SEC61A1P61619 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.5■□□□□ 0.87
SEC61A1P61619 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SEC61A1P61619 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.5■□□□□ 0.87
SEC61A1P61619 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SEC61A1P61619 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.5■□□□□ 0.87
SEC61A1P61619 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SEC61A1P61619 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SEC61A1P61619 AL359504.2-201ENST00000605506 1601 ntBASIC20.49■□□□□ 0.87
SEC61A1P61619 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.49■□□□□ 0.87
SEC61A1P61619 AC079834.2-201ENST00000609776 1949 ntBASIC20.49■□□□□ 0.87
SEC61A1P61619 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SEC61A1P61619 AC142381.3-201ENST00000568208 1670 ntBASIC20.49■□□□□ 0.87
SEC61A1P61619 KRT18P60-201ENST00000312876 1297 ntBASIC20.49■□□□□ 0.87
SEC61A1P61619 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SEC61A1P61619 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.49■□□□□ 0.87
SEC61A1P61619 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SEC61A1P61619 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SEC61A1P61619 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SEC61A1P61619 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SEC61A1P61619 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SEC61A1P61619 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEC61A1P61619 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SEC61A1P61619 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.48■□□□□ 0.87
SEC61A1P61619 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SEC61A1P61619 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEC61A1P61619 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEC61A1P61619 AC009831.1-201ENST00000580420 1582 ntBASIC20.47■□□□□ 0.87
SEC61A1P61619 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEC61A1P61619 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.47■□□□□ 0.87
SEC61A1P61619 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SEC61A1P61619 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEC61A1P61619 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEC61A1P61619 AC012354.3-201ENST00000623734 483 ntBASIC20.47■□□□□ 0.87
SEC61A1P61619 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEC61A1P61619 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SEC61A1P61619 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SEC61A1P61619 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SEC61A1P61619 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.46■□□□□ 0.87
SEC61A1P61619 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.46■□□□□ 0.87
SEC61A1P61619 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SEC61A1P61619 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.46■□□□□ 0.87
SEC61A1P61619 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.46■□□□□ 0.87
SEC61A1P61619 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SEC61A1P61619 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
SEC61A1P61619 AL139125.2-201ENST00000623134 1869 ntBASIC20.45■□□□□ 0.86
SEC61A1P61619 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SEC61A1P61619 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SEC61A1P61619 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.45■□□□□ 0.86
SEC61A1P61619 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SEC61A1P61619 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SEC61A1P61619 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SEC61A1P61619 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SEC61A1P61619 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SEC61A1P61619 AC133552.2-201ENST00000619106 1032 ntBASIC20.45■□□□□ 0.86
SEC61A1P61619 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SEC61A1P61619 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SEC61A1P61619 AC068473.5-201ENST00000616428 2072 ntBASIC20.44■□□□□ 0.86
SEC61A1P61619 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms