Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HMGA2P52926 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
HMGA2P52926 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HMGA2P52926 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
HMGA2P52926 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.75■■□□□ 1.07
HMGA2P52926 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HMGA2P52926 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.75■■□□□ 1.07
HMGA2P52926 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
HMGA2P52926 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.75■■□□□ 1.07
HMGA2P52926 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HMGA2P52926 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
HMGA2P52926 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HMGA2P52926 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HMGA2P52926 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HMGA2P52926 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HMGA2P52926 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.74■■□□□ 1.07
HMGA2P52926 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
HMGA2P52926 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
HMGA2P52926 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HMGA2P52926 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
HMGA2P52926 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HMGA2P52926 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.73■■□□□ 1.07
HMGA2P52926 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
HMGA2P52926 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.73■■□□□ 1.07
HMGA2P52926 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HMGA2P52926 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HMGA2P52926 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HMGA2P52926 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
HMGA2P52926 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HMGA2P52926 CR559946.2-201ENST00000623684 991 ntBASIC21.72■■□□□ 1.07
HMGA2P52926 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
HMGA2P52926 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HMGA2P52926 AC012676.1-201ENST00000574705 1949 ntBASIC21.72■■□□□ 1.07
HMGA2P52926 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
HMGA2P52926 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HMGA2P52926 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HMGA2P52926 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.71■■□□□ 1.07
HMGA2P52926 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.71■■□□□ 1.07
HMGA2P52926 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.71■■□□□ 1.07
HMGA2P52926 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HMGA2P52926 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.71■■□□□ 1.07
HMGA2P52926 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HMGA2P52926 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.71■■□□□ 1.07
HMGA2P52926 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HMGA2P52926 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HMGA2P52926 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.7■■□□□ 1.07
HMGA2P52926 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.7■■□□□ 1.07
HMGA2P52926 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HMGA2P52926 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
HMGA2P52926 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.7■■□□□ 1.06
HMGA2P52926 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HMGA2P52926 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HMGA2P52926 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HMGA2P52926 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.7■■□□□ 1.06
HMGA2P52926 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
HMGA2P52926 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
HMGA2P52926 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HMGA2P52926 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HMGA2P52926 AC025884.2-201ENST00000553429 711 ntBASIC21.69■■□□□ 1.06
HMGA2P52926 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HMGA2P52926 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HMGA2P52926 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
HMGA2P52926 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.68■■□□□ 1.06
HMGA2P52926 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HMGA2P52926 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
HMGA2P52926 MIR6089-201ENST00000616698 64 ntBASIC21.68■■□□□ 1.06
HMGA2P52926 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.68■■□□□ 1.06
HMGA2P52926 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
HMGA2P52926 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.68■■□□□ 1.06
HMGA2P52926 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.67■■□□□ 1.06
HMGA2P52926 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.67■■□□□ 1.06
HMGA2P52926 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.67■■□□□ 1.06
HMGA2P52926 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HMGA2P52926 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HMGA2P52926 AC133561.1-201ENST00000568600 2415 ntBASIC21.67■■□□□ 1.06
HMGA2P52926 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HMGA2P52926 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.66■■□□□ 1.06
HMGA2P52926 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.66■■□□□ 1.06
HMGA2P52926 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
HMGA2P52926 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
HMGA2P52926 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.66■■□□□ 1.06
HMGA2P52926 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
HMGA2P52926 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.66■■□□□ 1.06
HMGA2P52926 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HMGA2P52926 AC004812.2-201ENST00000611079 2094 ntBASIC21.65■■□□□ 1.06
HMGA2P52926 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HMGA2P52926 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HMGA2P52926 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HMGA2P52926 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HMGA2P52926 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HMGA2P52926 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HMGA2P52926 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.64■■□□□ 1.06
HMGA2P52926 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HMGA2P52926 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.64■■□□□ 1.05
HMGA2P52926 MIR3648-2-201ENST00000581792 180 ntBASIC21.64■■□□□ 1.05
HMGA2P52926 MIR3648-1-201ENST00000615959 180 ntBASIC21.64■■□□□ 1.05
HMGA2P52926 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HMGA2P52926 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HMGA2P52926 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HMGA2P52926 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms