Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CSNK1A1P48729 MIR6765-201ENST00000614092 87 ntBASIC21.07■□□□□ 0.96
CSNK1A1P48729 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CSNK1A1P48729 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.07■□□□□ 0.96
CSNK1A1P48729 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CSNK1A1P48729 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.06■□□□□ 0.96
CSNK1A1P48729 AC129492.7-201ENST00000622992 756 ntBASIC21.06■□□□□ 0.96
CSNK1A1P48729 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CSNK1A1P48729 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CSNK1A1P48729 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.05■□□□□ 0.96
CSNK1A1P48729 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CSNK1A1P48729 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CSNK1A1P48729 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.05■□□□□ 0.96
CSNK1A1P48729 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CSNK1A1P48729 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CSNK1A1P48729 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CSNK1A1P48729 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CSNK1A1P48729 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CSNK1A1P48729 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CSNK1A1P48729 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.04■□□□□ 0.96
CSNK1A1P48729 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSNK1A1P48729 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSNK1A1P48729 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CSNK1A1P48729 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CSNK1A1P48729 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.04■□□□□ 0.96
CSNK1A1P48729 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.04■□□□□ 0.96
CSNK1A1P48729 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSNK1A1P48729 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSNK1A1P48729 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
CSNK1A1P48729 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CSNK1A1P48729 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.04■□□□□ 0.96
CSNK1A1P48729 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CSNK1A1P48729 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.03■□□□□ 0.96
CSNK1A1P48729 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK1A1P48729 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK1A1P48729 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK1A1P48729 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK1A1P48729 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK1A1P48729 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK1A1P48729 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
CSNK1A1P48729 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.02■□□□□ 0.96
CSNK1A1P48729 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.02■□□□□ 0.96
CSNK1A1P48729 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSNK1A1P48729 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSNK1A1P48729 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CSNK1A1P48729 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
CSNK1A1P48729 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
CSNK1A1P48729 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CSNK1A1P48729 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CSNK1A1P48729 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK1A1P48729 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.01■□□□□ 0.95
CSNK1A1P48729 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CSNK1A1P48729 RPS2P7-201ENST00000447334 885 ntBASIC21.01■□□□□ 0.95
CSNK1A1P48729 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.01■□□□□ 0.95
CSNK1A1P48729 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CSNK1A1P48729 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK1A1P48729 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CSNK1A1P48729 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CSNK1A1P48729 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CSNK1A1P48729 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CSNK1A1P48729 AC022211.4-201ENST00000625094 2161 ntBASIC21■□□□□ 0.95
CSNK1A1P48729 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CSNK1A1P48729 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CSNK1A1P48729 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21■□□□□ 0.95
CSNK1A1P48729 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21■□□□□ 0.95
CSNK1A1P48729 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.99■□□□□ 0.95
CSNK1A1P48729 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK1A1P48729 SLC6A10P-202ENST00000431994 2058 ntBASIC20.99■□□□□ 0.95
CSNK1A1P48729 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK1A1P48729 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK1A1P48729 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.99■□□□□ 0.95
CSNK1A1P48729 AC142381.3-201ENST00000568208 1670 ntBASIC20.99■□□□□ 0.95
CSNK1A1P48729 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSNK1A1P48729 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CSNK1A1P48729 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CSNK1A1P48729 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSNK1A1P48729 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSNK1A1P48729 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CSNK1A1P48729 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.98■□□□□ 0.95
CSNK1A1P48729 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSNK1A1P48729 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.97■□□□□ 0.95
CSNK1A1P48729 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CSNK1A1P48729 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CSNK1A1P48729 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSNK1A1P48729 AC087393.1-201ENST00000582896 145 ntBASIC20.97■□□□□ 0.95
CSNK1A1P48729 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSNK1A1P48729 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CSNK1A1P48729 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSNK1A1P48729 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSNK1A1P48729 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSNK1A1P48729 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSNK1A1P48729 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSNK1A1P48729 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSNK1A1P48729 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSNK1A1P48729 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.96■□□□□ 0.95
CSNK1A1P48729 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CSNK1A1P48729 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CSNK1A1P48729 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.96■□□□□ 0.95
CSNK1A1P48729 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CSNK1A1P48729 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms