Protein–RNA interactions for Protein: P48378

RFX2, DNA-binding protein RFX2, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2P48378 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RFX2P48378 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.61■□□□□ 0.89
RFX2P48378 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.61■□□□□ 0.89
RFX2P48378 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFX2P48378 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFX2P48378 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RFX2P48378 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFX2P48378 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFX2P48378 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFX2P48378 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RFX2P48378 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RFX2P48378 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFX2P48378 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFX2P48378 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
RFX2P48378 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RFX2P48378 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.59■□□□□ 0.89
RFX2P48378 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFX2P48378 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.59■□□□□ 0.89
RFX2P48378 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFX2P48378 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.59■□□□□ 0.89
RFX2P48378 SUZ12P1-203ENST00000578195 985 ntBASIC20.59■□□□□ 0.89
RFX2P48378 EP400NL-214ENST00000641289 2402 ntBASIC20.59■□□□□ 0.89
RFX2P48378 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RFX2P48378 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.59■□□□□ 0.89
RFX2P48378 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.59■□□□□ 0.89
RFX2P48378 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.59■□□□□ 0.89
RFX2P48378 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFX2P48378 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFX2P48378 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFX2P48378 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RFX2P48378 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.58■□□□□ 0.89
RFX2P48378 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.58■□□□□ 0.89
RFX2P48378 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RFX2P48378 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RFX2P48378 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFX2P48378 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.57■□□□□ 0.88
RFX2P48378 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.57■□□□□ 0.88
RFX2P48378 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.57■□□□□ 0.88
RFX2P48378 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.57■□□□□ 0.88
RFX2P48378 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFX2P48378 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.57■□□□□ 0.88
RFX2P48378 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFX2P48378 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.57■□□□□ 0.88
RFX2P48378 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFX2P48378 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.57■□□□□ 0.88
RFX2P48378 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.57■□□□□ 0.88
RFX2P48378 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RFX2P48378 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RFX2P48378 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFX2P48378 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RFX2P48378 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RFX2P48378 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RFX2P48378 ABCB10P4-201ENST00000566803 2184 ntBASIC20.56■□□□□ 0.88
RFX2P48378 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RFX2P48378 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFX2P48378 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.55■□□□□ 0.88
RFX2P48378 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX2P48378 AC141586.4-201ENST00000624558 1573 ntBASIC20.55■□□□□ 0.88
RFX2P48378 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RFX2P48378 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX2P48378 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RFX2P48378 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX2P48378 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.55■□□□□ 0.88
RFX2P48378 AC110285.7-201ENST00000624417 1536 ntBASIC20.55■□□□□ 0.88
RFX2P48378 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
RFX2P48378 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.55■□□□□ 0.88
RFX2P48378 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RFX2P48378 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RFX2P48378 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RFX2P48378 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.54■□□□□ 0.88
RFX2P48378 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.54■□□□□ 0.88
RFX2P48378 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RFX2P48378 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.54■□□□□ 0.88
RFX2P48378 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RFX2P48378 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RFX2P48378 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFX2P48378 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFX2P48378 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RFX2P48378 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RFX2P48378 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFX2P48378 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RFX2P48378 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFX2P48378 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RFX2P48378 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.53■□□□□ 0.88
RFX2P48378 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RFX2P48378 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RFX2P48378 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFX2P48378 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFX2P48378 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RFX2P48378 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RFX2P48378 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
RFX2P48378 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFX2P48378 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.52■□□□□ 0.88
RFX2P48378 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.52■□□□□ 0.87
RFX2P48378 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.52■□□□□ 0.87
RFX2P48378 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFX2P48378 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFX2P48378 AC004812.2-201ENST00000611079 2094 ntBASIC20.51■□□□□ 0.87
RFX2P48378 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RFX2P48378 DUX4L28-201ENST00000623687 678 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms