Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC16.32■□□□□ 0.2
RPL13AP40429 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RPL13AP40429 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPL13AP40429 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC16.32■□□□□ 0.2
RPL13AP40429 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.32■□□□□ 0.2
RPL13AP40429 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPL13AP40429 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
RPL13AP40429 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RPL13AP40429 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPL13AP40429 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPL13AP40429 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPL13AP40429 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RPL13AP40429 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC16.31■□□□□ 0.2
RPL13AP40429 WASH5P-204ENST00000632292 975 ntBASIC16.31■□□□□ 0.2
RPL13AP40429 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RPL13AP40429 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPL13AP40429 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPL13AP40429 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPL13AP40429 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPL13AP40429 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPL13AP40429 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPL13AP40429 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RPL13AP40429 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RPL13AP40429 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPL13AP40429 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
RPL13AP40429 AC068473.5-201ENST00000616428 2072 ntBASIC16.3■□□□□ 0.2
RPL13AP40429 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPL13AP40429 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RPL13AP40429 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPL13AP40429 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPL13AP40429 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC16.3■□□□□ 0.2
RPL13AP40429 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC16.3■□□□□ 0.2
RPL13AP40429 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPL13AP40429 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RPL13AP40429 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RPL13AP40429 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPL13AP40429 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPL13AP40429 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RPL13AP40429 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPL13AP40429 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPL13AP40429 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPL13AP40429 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPL13AP40429 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RPL13AP40429 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
RPL13AP40429 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPL13AP40429 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RPL13AP40429 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPL13AP40429 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RPL13AP40429 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPL13AP40429 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPL13AP40429 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RPL13AP40429 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPL13AP40429 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC16.28■□□□□ 0.2
RPL13AP40429 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPL13AP40429 AC142381.3-201ENST00000568208 1670 ntBASIC16.28■□□□□ 0.2
RPL13AP40429 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPL13AP40429 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPL13AP40429 PREB-202ENST00000406567 1910 ntTSL 5 BASIC16.28■□□□□ 0.2
RPL13AP40429 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPL13AP40429 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC16.28■□□□□ 0.2
RPL13AP40429 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPL13AP40429 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC16.28■□□□□ 0.2
RPL13AP40429 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RPL13AP40429 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPL13AP40429 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPL13AP40429 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPL13AP40429 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPL13AP40429 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPL13AP40429 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPL13AP40429 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPL13AP40429 AC127502.1-201ENST00000399971 1502 ntBASIC16.27■□□□□ 0.2
RPL13AP40429 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC16.27■□□□□ 0.2
RPL13AP40429 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RPL13AP40429 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
RPL13AP40429 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RPL13AP40429 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC16.27■□□□□ 0.19
RPL13AP40429 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
RPL13AP40429 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPL13AP40429 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RPL13AP40429 AL391121.1-201ENST00000607967 1349 ntBASIC16.26■□□□□ 0.19
RPL13AP40429 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPL13AP40429 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPL13AP40429 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPL13AP40429 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC16.26■□□□□ 0.19
RPL13AP40429 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPL13AP40429 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPL13AP40429 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPL13AP40429 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPL13AP40429 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RPL13AP40429 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPL13AP40429 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
RPL13AP40429 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC16.25■□□□□ 0.19
RPL13AP40429 SUZ12P1-203ENST00000578195 985 ntBASIC16.25■□□□□ 0.19
RPL13AP40429 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
RPL13AP40429 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPL13AP40429 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RPL13AP40429 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPL13AP40429 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.24■□□□□ 0.19
RPL13AP40429 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPL13AP40429 AC018358.1-201ENST00000631079 1402 ntBASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms