Protein–RNA interactions for Protein: P28329

CHAT, Choline O-acetyltransferase, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHATP28329 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHATP28329 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHATP28329 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CHATP28329 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.11■□□□□ 0.81
CHATP28329 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CHATP28329 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHATP28329 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.11■□□□□ 0.81
CHATP28329 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CHATP28329 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHATP28329 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHATP28329 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CHATP28329 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHATP28329 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHATP28329 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.1■□□□□ 0.81
CHATP28329 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.1■□□□□ 0.81
CHATP28329 AL157400.5-201ENST00000507624 621 ntBASIC20.1■□□□□ 0.81
CHATP28329 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHATP28329 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHATP28329 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHATP28329 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.09■□□□□ 0.81
CHATP28329 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHATP28329 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHATP28329 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CHATP28329 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHATP28329 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.09■□□□□ 0.81
CHATP28329 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHATP28329 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CHATP28329 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHATP28329 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHATP28329 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CHATP28329 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHATP28329 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.08■□□□□ 0.81
CHATP28329 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.08■□□□□ 0.81
CHATP28329 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHATP28329 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.08■□□□□ 0.8
CHATP28329 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHATP28329 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHATP28329 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.07■□□□□ 0.8
CHATP28329 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CHATP28329 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CHATP28329 AC025884.2-201ENST00000553429 711 ntBASIC20.07■□□□□ 0.8
CHATP28329 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHATP28329 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.07■□□□□ 0.8
CHATP28329 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHATP28329 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHATP28329 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CHATP28329 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.07■□□□□ 0.8
CHATP28329 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHATP28329 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.07■□□□□ 0.8
CHATP28329 LINC01124-201ENST00000409786 2117 ntBASIC20.06■□□□□ 0.8
CHATP28329 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHATP28329 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHATP28329 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHATP28329 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHATP28329 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHATP28329 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.06■□□□□ 0.8
CHATP28329 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHATP28329 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHATP28329 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHATP28329 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.05■□□□□ 0.8
CHATP28329 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHATP28329 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHATP28329 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHATP28329 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CHATP28329 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHATP28329 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHATP28329 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHATP28329 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHATP28329 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
CHATP28329 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHATP28329 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHATP28329 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHATP28329 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHATP28329 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
CHATP28329 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHATP28329 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.04■□□□□ 0.8
CHATP28329 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHATP28329 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHATP28329 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHATP28329 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CHATP28329 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHATP28329 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHATP28329 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHATP28329 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHATP28329 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHATP28329 AC060814.1-201ENST00000554326 538 ntBASIC20.03■□□□□ 0.8
CHATP28329 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHATP28329 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CHATP28329 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
CHATP28329 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHATP28329 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.02■□□□□ 0.8
CHATP28329 MIR3960-201ENST00000583311 91 ntBASIC20.02■□□□□ 0.8
CHATP28329 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHATP28329 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
CHATP28329 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHATP28329 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
CHATP28329 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.02■□□□□ 0.79
CHATP28329 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.79
CHATP28329 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHATP28329 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms