Protein–RNA interactions for Protein: P25440

BRD2, Bromodomain-containing protein 2, humanhuman

Known RBP Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2P25440 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
BRD2P25440 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
BRD2P25440 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.36■■□□□ 1.65
BRD2P25440 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC25.36■■□□□ 1.65
BRD2P25440 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
BRD2P25440 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
BRD2P25440 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC25.35■■□□□ 1.65
BRD2P25440 MIR6765-201ENST00000614092 87 ntBASIC25.35■■□□□ 1.65
BRD2P25440 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
BRD2P25440 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
BRD2P25440 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
BRD2P25440 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
BRD2P25440 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC25.34■■□□□ 1.65
BRD2P25440 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
BRD2P25440 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
BRD2P25440 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.33■■□□□ 1.65
BRD2P25440 DUX4L18-201ENST00000553347 1267 ntBASIC25.33■■□□□ 1.65
BRD2P25440 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC25.33■■□□□ 1.65
BRD2P25440 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
BRD2P25440 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
BRD2P25440 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
BRD2P25440 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.33■■□□□ 1.65
BRD2P25440 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
BRD2P25440 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
BRD2P25440 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
BRD2P25440 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC25.32■■□□□ 1.64
BRD2P25440 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.32■■□□□ 1.64
BRD2P25440 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
BRD2P25440 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
BRD2P25440 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC25.31■■□□□ 1.64
BRD2P25440 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.31■■□□□ 1.64
BRD2P25440 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
BRD2P25440 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC25.31■■□□□ 1.64
BRD2P25440 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
BRD2P25440 AC004987.1-201ENST00000428627 508 ntBASIC25.3■■□□□ 1.64
BRD2P25440 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
BRD2P25440 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC25.3■■□□□ 1.64
BRD2P25440 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
BRD2P25440 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
BRD2P25440 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.29■■□□□ 1.64
BRD2P25440 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
BRD2P25440 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
BRD2P25440 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
BRD2P25440 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
BRD2P25440 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25.29■■□□□ 1.64
BRD2P25440 RPS2P7-201ENST00000447334 885 ntBASIC25.29■■□□□ 1.64
BRD2P25440 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
BRD2P25440 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
BRD2P25440 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
BRD2P25440 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.28■■□□□ 1.64
BRD2P25440 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
BRD2P25440 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
BRD2P25440 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
BRD2P25440 IDNK-203ENST00000405990 629 ntTSL 2 BASIC25.28■■□□□ 1.64
BRD2P25440 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
BRD2P25440 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
BRD2P25440 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
BRD2P25440 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
BRD2P25440 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.27■■□□□ 1.64
BRD2P25440 KRT18P10-201ENST00000388836 1287 ntBASIC25.27■■□□□ 1.64
BRD2P25440 ATP5G2P3-201ENST00000429083 425 ntBASIC25.27■■□□□ 1.64
BRD2P25440 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
BRD2P25440 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
BRD2P25440 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC25.26■■□□□ 1.63
BRD2P25440 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC25.26■■□□□ 1.63
BRD2P25440 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
BRD2P25440 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC25.26■■□□□ 1.63
BRD2P25440 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
BRD2P25440 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
BRD2P25440 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
BRD2P25440 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.26■■□□□ 1.63
BRD2P25440 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
BRD2P25440 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
BRD2P25440 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
BRD2P25440 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
BRD2P25440 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
BRD2P25440 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
BRD2P25440 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
BRD2P25440 SLC6A10P-202ENST00000431994 2058 ntBASIC25.25■■□□□ 1.63
BRD2P25440 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
BRD2P25440 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
BRD2P25440 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
BRD2P25440 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC25.24■■□□□ 1.63
BRD2P25440 AC087393.1-201ENST00000582896 145 ntBASIC25.24■■□□□ 1.63
BRD2P25440 AC012354.3-201ENST00000623734 483 ntBASIC25.24■■□□□ 1.63
BRD2P25440 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
BRD2P25440 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC25.24■■□□□ 1.63
BRD2P25440 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
BRD2P25440 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC25.23■■□□□ 1.63
BRD2P25440 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
BRD2P25440 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
BRD2P25440 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
BRD2P25440 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
BRD2P25440 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC25.23■■□□□ 1.63
BRD2P25440 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
BRD2P25440 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
BRD2P25440 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
BRD2P25440 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC25.22■■□□□ 1.63
BRD2P25440 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.22■■□□□ 1.63
BRD2P25440 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms