Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.09■□□□□ 0.81
COL8A2P25067 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.09■□□□□ 0.81
COL8A2P25067 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL8A2P25067 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL8A2P25067 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL8A2P25067 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL8A2P25067 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL8A2P25067 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL8A2P25067 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL8A2P25067 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
COL8A2P25067 AC022616.5-201ENST00000518796 181 ntBASIC20.08■□□□□ 0.81
COL8A2P25067 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL8A2P25067 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL8A2P25067 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
COL8A2P25067 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL8A2P25067 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.08■□□□□ 0.8
COL8A2P25067 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
COL8A2P25067 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL8A2P25067 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.07■□□□□ 0.8
COL8A2P25067 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL8A2P25067 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
COL8A2P25067 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL8A2P25067 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.07■□□□□ 0.8
COL8A2P25067 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
COL8A2P25067 ERN1-208ENST00000606895 2068 ntBASIC20.07■□□□□ 0.8
COL8A2P25067 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL8A2P25067 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL8A2P25067 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL8A2P25067 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL8A2P25067 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL8A2P25067 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL8A2P25067 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL8A2P25067 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.06■□□□□ 0.8
COL8A2P25067 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
COL8A2P25067 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.05■□□□□ 0.8
COL8A2P25067 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
COL8A2P25067 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL8A2P25067 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL8A2P25067 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL8A2P25067 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL8A2P25067 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL8A2P25067 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.05■□□□□ 0.8
COL8A2P25067 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.05■□□□□ 0.8
COL8A2P25067 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL8A2P25067 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL8A2P25067 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL8A2P25067 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL8A2P25067 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.04■□□□□ 0.8
COL8A2P25067 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL8A2P25067 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.04■□□□□ 0.8
COL8A2P25067 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.04■□□□□ 0.8
COL8A2P25067 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.04■□□□□ 0.8
COL8A2P25067 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.04■□□□□ 0.8
COL8A2P25067 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.03■□□□□ 0.8
COL8A2P25067 KRT18P24-201ENST00000344739 1156 ntBASIC20.03■□□□□ 0.8
COL8A2P25067 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL8A2P25067 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.03■□□□□ 0.8
COL8A2P25067 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.03■□□□□ 0.8
COL8A2P25067 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.03■□□□□ 0.8
COL8A2P25067 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
COL8A2P25067 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
COL8A2P25067 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL8A2P25067 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.02■□□□□ 0.8
COL8A2P25067 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
COL8A2P25067 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COL8A2P25067 AC239859.2-201ENST00000444165 318 ntBASIC20.02■□□□□ 0.8
COL8A2P25067 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.02■□□□□ 0.8
COL8A2P25067 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.02■□□□□ 0.8
COL8A2P25067 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL8A2P25067 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
COL8A2P25067 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.01■□□□□ 0.79
COL8A2P25067 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.01■□□□□ 0.79
COL8A2P25067 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL8A2P25067 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
COL8A2P25067 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL8A2P25067 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
COL8A2P25067 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
COL8A2P25067 AL592295.1-201ENST00000400984 884 ntBASIC20.01■□□□□ 0.79
COL8A2P25067 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL8A2P25067 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.01■□□□□ 0.79
COL8A2P25067 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL8A2P25067 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.01■□□□□ 0.79
COL8A2P25067 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.01■□□□□ 0.79
COL8A2P25067 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL8A2P25067 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL8A2P25067 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL8A2P25067 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL8A2P25067 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20■□□□□ 0.79
COL8A2P25067 AC120024.1-201ENST00000562672 995 ntBASIC20■□□□□ 0.79
COL8A2P25067 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL8A2P25067 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL8A2P25067 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20■□□□□ 0.79
COL8A2P25067 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL8A2P25067 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL8A2P25067 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL8A2P25067 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL8A2P25067 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.99■□□□□ 0.79
COL8A2P25067 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.99■□□□□ 0.79
COL8A2P25067 THA1P-201ENST00000590384 1145 ntBASIC19.99■□□□□ 0.79
COL8A2P25067 AC096887.2-201ENST00000623443 1957 ntBASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms