Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
DEFA4P12838 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.11■□□□□ 0.65
DEFA4P12838 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
DEFA4P12838 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DEFA4P12838 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
DEFA4P12838 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
DEFA4P12838 AC142381.3-201ENST00000568208 1670 ntBASIC19.11■□□□□ 0.65
DEFA4P12838 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DEFA4P12838 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DEFA4P12838 AC022211.4-201ENST00000625094 2161 ntBASIC19.1■□□□□ 0.65
DEFA4P12838 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
DEFA4P12838 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
DEFA4P12838 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DEFA4P12838 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.1■□□□□ 0.65
DEFA4P12838 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
DEFA4P12838 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
DEFA4P12838 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
DEFA4P12838 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
DEFA4P12838 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DEFA4P12838 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DEFA4P12838 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DEFA4P12838 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
DEFA4P12838 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
DEFA4P12838 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
DEFA4P12838 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DEFA4P12838 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.09■□□□□ 0.65
DEFA4P12838 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.09■□□□□ 0.65
DEFA4P12838 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DEFA4P12838 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
DEFA4P12838 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
DEFA4P12838 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.08■□□□□ 0.64
DEFA4P12838 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
DEFA4P12838 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
DEFA4P12838 AL139125.2-201ENST00000623134 1869 ntBASIC19.07■□□□□ 0.64
DEFA4P12838 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DEFA4P12838 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
DEFA4P12838 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DEFA4P12838 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.07■□□□□ 0.64
DEFA4P12838 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
DEFA4P12838 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
DEFA4P12838 AC133561.1-201ENST00000568600 2415 ntBASIC19.06■□□□□ 0.64
DEFA4P12838 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
DEFA4P12838 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DEFA4P12838 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.06■□□□□ 0.64
DEFA4P12838 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.06■□□□□ 0.64
DEFA4P12838 AC060814.1-201ENST00000554326 538 ntBASIC19.06■□□□□ 0.64
DEFA4P12838 AC022413.1-201ENST00000624602 984 ntBASIC19.06■□□□□ 0.64
DEFA4P12838 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
DEFA4P12838 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
DEFA4P12838 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.06■□□□□ 0.64
DEFA4P12838 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.06■□□□□ 0.64
DEFA4P12838 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.06■□□□□ 0.64
DEFA4P12838 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
DEFA4P12838 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DEFA4P12838 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.05■□□□□ 0.64
DEFA4P12838 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DEFA4P12838 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.05■□□□□ 0.64
DEFA4P12838 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DEFA4P12838 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.05■□□□□ 0.64
DEFA4P12838 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DEFA4P12838 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
DEFA4P12838 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
DEFA4P12838 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.04■□□□□ 0.64
DEFA4P12838 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
DEFA4P12838 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DEFA4P12838 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DEFA4P12838 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DEFA4P12838 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
DEFA4P12838 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
DEFA4P12838 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.04■□□□□ 0.64
DEFA4P12838 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DEFA4P12838 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.03■□□□□ 0.64
DEFA4P12838 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.03■□□□□ 0.64
DEFA4P12838 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
DEFA4P12838 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DEFA4P12838 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
DEFA4P12838 SMPD5-203ENST00000639008 1464 ntBASIC19.03■□□□□ 0.64
DEFA4P12838 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.02■□□□□ 0.64
DEFA4P12838 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.02■□□□□ 0.64
DEFA4P12838 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.02■□□□□ 0.64
DEFA4P12838 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
DEFA4P12838 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
DEFA4P12838 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
DEFA4P12838 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DEFA4P12838 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
DEFA4P12838 MIR3960-201ENST00000583311 91 ntBASIC19.02■□□□□ 0.64
DEFA4P12838 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
DEFA4P12838 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
DEFA4P12838 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
DEFA4P12838 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
DEFA4P12838 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
DEFA4P12838 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.01■□□□□ 0.63
DEFA4P12838 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
DEFA4P12838 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DEFA4P12838 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.01■□□□□ 0.63
DEFA4P12838 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DEFA4P12838 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DEFA4P12838 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
DEFA4P12838 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
DEFA4P12838 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms