Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
HMGN1P05114 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HMGN1P05114 LINC00543-201ENST00000567234 1845 ntBASIC21.42■■□□□ 1.02
HMGN1P05114 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
HMGN1P05114 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
HMGN1P05114 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HMGN1P05114 AC141586.4-201ENST00000624558 1573 ntBASIC21.41■■□□□ 1.02
HMGN1P05114 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HMGN1P05114 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HMGN1P05114 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HMGN1P05114 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.41■■□□□ 1.02
HMGN1P05114 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HMGN1P05114 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HMGN1P05114 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HMGN1P05114 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.4■■□□□ 1.02
HMGN1P05114 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HMGN1P05114 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.4■■□□□ 1.02
HMGN1P05114 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HMGN1P05114 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
HMGN1P05114 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
HMGN1P05114 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.39■■□□□ 1.01
HMGN1P05114 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
HMGN1P05114 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.39■■□□□ 1.01
HMGN1P05114 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HMGN1P05114 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.39■■□□□ 1.01
HMGN1P05114 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMGN1P05114 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
HMGN1P05114 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMGN1P05114 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HMGN1P05114 CR559946.2-201ENST00000623684 991 ntBASIC21.38■■□□□ 1.01
HMGN1P05114 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.38■■□□□ 1.01
HMGN1P05114 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HMGN1P05114 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMGN1P05114 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.37■■□□□ 1.01
HMGN1P05114 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGN1P05114 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMGN1P05114 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.36■■□□□ 1.01
HMGN1P05114 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMGN1P05114 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMGN1P05114 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HMGN1P05114 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HMGN1P05114 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.36■■□□□ 1.01
HMGN1P05114 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMGN1P05114 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.35■■□□□ 1.01
HMGN1P05114 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HMGN1P05114 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HMGN1P05114 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.35■■□□□ 1.01
HMGN1P05114 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HMGN1P05114 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HMGN1P05114 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HMGN1P05114 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
HMGN1P05114 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HMGN1P05114 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
HMGN1P05114 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.34■■□□□ 1.01
HMGN1P05114 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HMGN1P05114 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
HMGN1P05114 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
HMGN1P05114 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.33■■□□□ 1.01
HMGN1P05114 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HMGN1P05114 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HMGN1P05114 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HMGN1P05114 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HMGN1P05114 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
HMGN1P05114 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.33■■□□□ 1
HMGN1P05114 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.33■■□□□ 1
HMGN1P05114 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.32■■□□□ 1
HMGN1P05114 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HMGN1P05114 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HMGN1P05114 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.32■■□□□ 1
HMGN1P05114 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HMGN1P05114 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
HMGN1P05114 MIR3648-2-201ENST00000581792 180 ntBASIC21.32■■□□□ 1
HMGN1P05114 MIR3648-1-201ENST00000615959 180 ntBASIC21.32■■□□□ 1
HMGN1P05114 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.32■■□□□ 1
HMGN1P05114 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HMGN1P05114 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.32■■□□□ 1
HMGN1P05114 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.32■■□□□ 1
HMGN1P05114 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HMGN1P05114 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.32■■□□□ 1
HMGN1P05114 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HMGN1P05114 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
HMGN1P05114 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HMGN1P05114 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.31■■□□□ 1
HMGN1P05114 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.31■■□□□ 1
HMGN1P05114 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.31■■□□□ 1
HMGN1P05114 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
HMGN1P05114 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.31■■□□□ 1
HMGN1P05114 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
HMGN1P05114 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.3■■□□□ 1
HMGN1P05114 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.3■■□□□ 1
HMGN1P05114 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.3■■□□□ 1
HMGN1P05114 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HMGN1P05114 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.3■■□□□ 1
HMGN1P05114 MIR3960-201ENST00000583311 91 ntBASIC21.3■■□□□ 1
HMGN1P05114 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HMGN1P05114 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.29■■□□□ 1
HMGN1P05114 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HMGN1P05114 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
HMGN1P05114 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HMGN1P05114 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms