Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PDGFAP04085 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PDGFAP04085 TSPY9P-201ENST00000440215 945 ntBASIC22.13■■□□□ 1.13
PDGFAP04085 TSPY11P-201ENST00000442607 1045 ntBASIC22.13■■□□□ 1.13
PDGFAP04085 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PDGFAP04085 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PDGFAP04085 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.13■■□□□ 1.13
PDGFAP04085 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PDGFAP04085 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.12■■□□□ 1.13
PDGFAP04085 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.12■■□□□ 1.13
PDGFAP04085 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDGFAP04085 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDGFAP04085 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PDGFAP04085 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
PDGFAP04085 AC137630.3-201ENST00000607245 391 ntBASIC22.11■■□□□ 1.13
PDGFAP04085 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.11■■□□□ 1.13
PDGFAP04085 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
PDGFAP04085 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PDGFAP04085 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
PDGFAP04085 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.11■■□□□ 1.13
PDGFAP04085 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PDGFAP04085 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
PDGFAP04085 MIR638-201ENST00000385237 100 ntBASIC22.1■■□□□ 1.13
PDGFAP04085 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PDGFAP04085 AC120024.1-201ENST00000562672 995 ntBASIC22.1■■□□□ 1.13
PDGFAP04085 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.1■■□□□ 1.13
PDGFAP04085 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PDGFAP04085 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
PDGFAP04085 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PDGFAP04085 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PDGFAP04085 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDGFAP04085 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDGFAP04085 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.09■■□□□ 1.13
PDGFAP04085 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDGFAP04085 AC021242.3-201ENST00000607598 1377 ntBASIC22.09■■□□□ 1.13
PDGFAP04085 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDGFAP04085 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PDGFAP04085 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PDGFAP04085 KRT18P10-201ENST00000388836 1287 ntBASIC22.08■■□□□ 1.13
PDGFAP04085 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.08■■□□□ 1.13
PDGFAP04085 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PDGFAP04085 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.08■■□□□ 1.12
PDGFAP04085 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
PDGFAP04085 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PDGFAP04085 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PDGFAP04085 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PDGFAP04085 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PDGFAP04085 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PDGFAP04085 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.07■■□□□ 1.12
PDGFAP04085 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.07■■□□□ 1.12
PDGFAP04085 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PDGFAP04085 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PDGFAP04085 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.06■■□□□ 1.12
PDGFAP04085 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC22.06■■□□□ 1.12
PDGFAP04085 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC22.06■■□□□ 1.12
PDGFAP04085 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PDGFAP04085 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PDGFAP04085 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.06■■□□□ 1.12
PDGFAP04085 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.06■■□□□ 1.12
PDGFAP04085 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.06■■□□□ 1.12
PDGFAP04085 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
PDGFAP04085 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.06■■□□□ 1.12
PDGFAP04085 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDGFAP04085 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
PDGFAP04085 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDGFAP04085 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.05■■□□□ 1.12
PDGFAP04085 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.05■■□□□ 1.12
PDGFAP04085 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.05■■□□□ 1.12
PDGFAP04085 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDGFAP04085 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDGFAP04085 DRD5P2-201ENST00000421395 2012 ntBASIC22.04■■□□□ 1.12
PDGFAP04085 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.04■■□□□ 1.12
PDGFAP04085 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PDGFAP04085 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
PDGFAP04085 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.04■■□□□ 1.12
PDGFAP04085 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.04■■□□□ 1.12
PDGFAP04085 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.04■■□□□ 1.12
PDGFAP04085 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.04■■□□□ 1.12
PDGFAP04085 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PDGFAP04085 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
PDGFAP04085 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PDGFAP04085 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
PDGFAP04085 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PDGFAP04085 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PDGFAP04085 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.03■■□□□ 1.12
PDGFAP04085 AC131281.2-201ENST00000520478 145 ntBASIC22.03■■□□□ 1.12
PDGFAP04085 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PDGFAP04085 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.03■■□□□ 1.12
PDGFAP04085 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PDGFAP04085 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDGFAP04085 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDGFAP04085 AC092028.1-203ENST00000608262 953 ntBASIC22.02■■□□□ 1.12
PDGFAP04085 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PDGFAP04085 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.02■■□□□ 1.12
PDGFAP04085 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
PDGFAP04085 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
PDGFAP04085 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
PDGFAP04085 BX255925.1-201ENST00000566954 1854 ntBASIC22.01■■□□□ 1.11
PDGFAP04085 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PDGFAP04085 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms