Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC26.52■■□□□ 1.84
CD4P01730 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CD4P01730 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CD4P01730 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.51■■□□□ 1.83
CD4P01730 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CD4P01730 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
CD4P01730 AL136116.3-201ENST00000402907 1138 ntBASIC26.51■■□□□ 1.83
CD4P01730 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.51■■□□□ 1.83
CD4P01730 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.51■■□□□ 1.83
CD4P01730 AL117332.1-201ENST00000622628 974 ntBASIC26.51■■□□□ 1.83
CD4P01730 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CD4P01730 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CD4P01730 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.5■■□□□ 1.83
CD4P01730 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CD4P01730 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.5■■□□□ 1.83
CD4P01730 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CD4P01730 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
CD4P01730 MIR3621-201ENST00000580529 85 ntBASIC26.49■■□□□ 1.83
CD4P01730 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.49■■□□□ 1.83
CD4P01730 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CD4P01730 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CD4P01730 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26.48■■□□□ 1.83
CD4P01730 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.48■■□□□ 1.83
CD4P01730 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CD4P01730 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
CD4P01730 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CD4P01730 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CD4P01730 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CD4P01730 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CD4P01730 AC110285.6-201ENST00000617652 491 ntBASIC26.47■■□□□ 1.83
CD4P01730 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CD4P01730 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CD4P01730 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC26.46■■□□□ 1.83
CD4P01730 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
CD4P01730 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CD4P01730 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC26.46■■□□□ 1.83
CD4P01730 AC010997.5-201ENST00000609182 354 ntBASIC26.46■■□□□ 1.83
CD4P01730 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
CD4P01730 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CD4P01730 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CD4P01730 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
CD4P01730 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
CD4P01730 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.45■■□□□ 1.82
CD4P01730 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.45■■□□□ 1.82
CD4P01730 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC26.45■■□□□ 1.82
CD4P01730 MIR6724-1-201ENST00000616420 92 ntBASIC26.45■■□□□ 1.82
CD4P01730 MIR6724-2-201ENST00000616483 92 ntBASIC26.45■■□□□ 1.82
CD4P01730 MIR6724-4-201ENST00000617390 92 ntBASIC26.45■■□□□ 1.82
CD4P01730 MIR6724-3-201ENST00000622482 92 ntBASIC26.45■■□□□ 1.82
CD4P01730 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
CD4P01730 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CD4P01730 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
CD4P01730 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.45■■□□□ 1.82
CD4P01730 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.45■■□□□ 1.82
CD4P01730 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.45■■□□□ 1.82
CD4P01730 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
CD4P01730 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.44■■□□□ 1.82
CD4P01730 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC26.44■■□□□ 1.82
CD4P01730 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
CD4P01730 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.43■■□□□ 1.82
CD4P01730 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CD4P01730 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
CD4P01730 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
CD4P01730 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC26.43■■□□□ 1.82
CD4P01730 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CD4P01730 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.42■■□□□ 1.82
CD4P01730 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.42■■□□□ 1.82
CD4P01730 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.42■■□□□ 1.82
CD4P01730 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.42■■□□□ 1.82
CD4P01730 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CD4P01730 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
CD4P01730 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC26.41■■□□□ 1.82
CD4P01730 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.41■■□□□ 1.82
CD4P01730 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CD4P01730 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
CD4P01730 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CD4P01730 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CD4P01730 AC142472.1-201ENST00000612013 1741 ntBASIC26.4■■□□□ 1.82
CD4P01730 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CD4P01730 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC26.4■■□□□ 1.82
CD4P01730 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.4■■□□□ 1.82
CD4P01730 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CD4P01730 MIR4466-201ENST00000606121 54 ntBASIC26.4■■□□□ 1.82
CD4P01730 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CD4P01730 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CD4P01730 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CD4P01730 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.39■■□□□ 1.82
CD4P01730 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC26.39■■□□□ 1.82
CD4P01730 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC26.39■■□□□ 1.82
CD4P01730 AC005837.3-201ENST00000612163 286 ntBASIC26.39■■□□□ 1.82
CD4P01730 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
CD4P01730 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.81
CD4P01730 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CD4P01730 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CD4P01730 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC26.38■■□□□ 1.81
CD4P01730 MTDHP2-201ENST00000601468 714 ntBASIC26.38■■□□□ 1.81
CD4P01730 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CD4P01730 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CD4P01730 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CD4P01730 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC26.37■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms