Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDH8O95206 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PCDH8O95206 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.78■■□□□ 1.4
PCDH8O95206 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.78■■□□□ 1.4
PCDH8O95206 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.78■■□□□ 1.4
PCDH8O95206 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDH8O95206 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
PCDH8O95206 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.78■■□□□ 1.4
PCDH8O95206 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDH8O95206 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDH8O95206 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDH8O95206 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
PCDH8O95206 GUSBP5-201ENST00000418136 578 ntBASIC23.77■■□□□ 1.4
PCDH8O95206 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.77■■□□□ 1.4
PCDH8O95206 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDH8O95206 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.76■■□□□ 1.39
PCDH8O95206 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDH8O95206 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDH8O95206 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.76■■□□□ 1.39
PCDH8O95206 AC120024.1-201ENST00000562672 995 ntBASIC23.76■■□□□ 1.39
PCDH8O95206 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDH8O95206 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDH8O95206 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.76■■□□□ 1.39
PCDH8O95206 ERN1-208ENST00000606895 2068 ntBASIC23.75■■□□□ 1.39
PCDH8O95206 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDH8O95206 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDH8O95206 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDH8O95206 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
PCDH8O95206 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDH8O95206 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
PCDH8O95206 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.75■■□□□ 1.39
PCDH8O95206 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDH8O95206 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDH8O95206 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
PCDH8O95206 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDH8O95206 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDH8O95206 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDH8O95206 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDH8O95206 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDH8O95206 BX664725.1-201ENST00000438252 379 ntBASIC23.73■■□□□ 1.39
PCDH8O95206 Z92544.1-202ENST00000571933 1220 ntBASIC23.73■■□□□ 1.39
PCDH8O95206 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
PCDH8O95206 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.73■■□□□ 1.39
PCDH8O95206 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
PCDH8O95206 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDH8O95206 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.72■■□□□ 1.39
PCDH8O95206 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.72■■□□□ 1.39
PCDH8O95206 KRT125P-201ENST00000546827 989 ntBASIC23.72■■□□□ 1.39
PCDH8O95206 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDH8O95206 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.72■■□□□ 1.39
PCDH8O95206 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.72■■□□□ 1.39
PCDH8O95206 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDH8O95206 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.72■■□□□ 1.39
PCDH8O95206 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDH8O95206 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDH8O95206 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDH8O95206 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.71■■□□□ 1.39
PCDH8O95206 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.71■■□□□ 1.39
PCDH8O95206 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDH8O95206 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDH8O95206 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDH8O95206 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.71■■□□□ 1.39
PCDH8O95206 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
PCDH8O95206 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDH8O95206 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
PCDH8O95206 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.7■■□□□ 1.38
PCDH8O95206 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDH8O95206 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.69■■□□□ 1.38
PCDH8O95206 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDH8O95206 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDH8O95206 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDH8O95206 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDH8O95206 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH8O95206 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.68■■□□□ 1.38
PCDH8O95206 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH8O95206 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH8O95206 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
PCDH8O95206 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH8O95206 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
PCDH8O95206 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.68■■□□□ 1.38
PCDH8O95206 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH8O95206 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
PCDH8O95206 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH8O95206 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.67■■□□□ 1.38
PCDH8O95206 AC096887.2-201ENST00000623443 1957 ntBASIC23.67■■□□□ 1.38
PCDH8O95206 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH8O95206 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
PCDH8O95206 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH8O95206 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.67■■□□□ 1.38
PCDH8O95206 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH8O95206 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH8O95206 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH8O95206 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH8O95206 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH8O95206 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH8O95206 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDH8O95206 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.66■■□□□ 1.38
PCDH8O95206 MIR4787-201ENST00000607364 84 ntBASIC23.66■■□□□ 1.38
PCDH8O95206 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDH8O95206 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms