Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC25.57■■□□□ 1.68
CSPG5O95196 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.57■■□□□ 1.68
CSPG5O95196 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.57■■□□□ 1.68
CSPG5O95196 MIR4281-201ENST00000580852 62 ntBASIC25.57■■□□□ 1.68
CSPG5O95196 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.57■■□□□ 1.68
CSPG5O95196 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CSPG5O95196 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CSPG5O95196 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CSPG5O95196 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CSPG5O95196 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.56■■□□□ 1.68
CSPG5O95196 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.56■■□□□ 1.68
CSPG5O95196 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
CSPG5O95196 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC25.55■■□□□ 1.68
CSPG5O95196 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CSPG5O95196 KRT18P10-201ENST00000388836 1287 ntBASIC25.55■■□□□ 1.68
CSPG5O95196 AL117332.1-201ENST00000622628 974 ntBASIC25.55■■□□□ 1.68
CSPG5O95196 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
CSPG5O95196 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
CSPG5O95196 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
CSPG5O95196 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.54■■□□□ 1.68
CSPG5O95196 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.54■■□□□ 1.68
CSPG5O95196 LINC01003-201ENST00000564834 1764 ntBASIC25.54■■□□□ 1.68
CSPG5O95196 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CSPG5O95196 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
CSPG5O95196 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CSPG5O95196 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
CSPG5O95196 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC25.54■■□□□ 1.68
CSPG5O95196 MTDHP2-201ENST00000601468 714 ntBASIC25.54■■□□□ 1.68
CSPG5O95196 AC010997.5-201ENST00000609182 354 ntBASIC25.54■■□□□ 1.68
CSPG5O95196 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
CSPG5O95196 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
CSPG5O95196 AC096631.2-201ENST00000436136 790 ntBASIC25.52■■□□□ 1.68
CSPG5O95196 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CSPG5O95196 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CSPG5O95196 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CSPG5O95196 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CSPG5O95196 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.68
CSPG5O95196 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CSPG5O95196 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CSPG5O95196 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
CSPG5O95196 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.51■■□□□ 1.67
CSPG5O95196 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.51■■□□□ 1.67
CSPG5O95196 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
CSPG5O95196 AC110285.6-201ENST00000617652 491 ntBASIC25.51■■□□□ 1.67
CSPG5O95196 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CSPG5O95196 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CSPG5O95196 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CSPG5O95196 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
CSPG5O95196 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
CSPG5O95196 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CSPG5O95196 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC25.5■■□□□ 1.67
CSPG5O95196 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CSPG5O95196 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
CSPG5O95196 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CSPG5O95196 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC25.49■■□□□ 1.67
CSPG5O95196 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CSPG5O95196 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
CSPG5O95196 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
CSPG5O95196 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CSPG5O95196 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CSPG5O95196 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CSPG5O95196 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
CSPG5O95196 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC25.47■■□□□ 1.67
CSPG5O95196 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
CSPG5O95196 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CSPG5O95196 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.46■■□□□ 1.67
CSPG5O95196 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.46■■□□□ 1.67
CSPG5O95196 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC25.46■■□□□ 1.67
CSPG5O95196 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.46■■□□□ 1.67
CSPG5O95196 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
CSPG5O95196 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CSPG5O95196 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CSPG5O95196 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
CSPG5O95196 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.45■■□□□ 1.66
CSPG5O95196 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.45■■□□□ 1.66
CSPG5O95196 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.45■■□□□ 1.66
CSPG5O95196 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC25.45■■□□□ 1.66
CSPG5O95196 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CSPG5O95196 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.45■■□□□ 1.66
CSPG5O95196 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
CSPG5O95196 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.45■■□□□ 1.66
CSPG5O95196 AP004609.3-201ENST00000610705 1884 ntBASIC25.45■■□□□ 1.66
CSPG5O95196 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
CSPG5O95196 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CSPG5O95196 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CSPG5O95196 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CSPG5O95196 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC25.44■■□□□ 1.66
CSPG5O95196 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CSPG5O95196 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC25.44■■□□□ 1.66
CSPG5O95196 MIR4466-201ENST00000606121 54 ntBASIC25.44■■□□□ 1.66
CSPG5O95196 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
CSPG5O95196 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.43■■□□□ 1.66
CSPG5O95196 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.43■■□□□ 1.66
CSPG5O95196 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.43■■□□□ 1.66
CSPG5O95196 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
CSPG5O95196 AC142472.1-201ENST00000612013 1741 ntBASIC25.43■■□□□ 1.66
CSPG5O95196 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CSPG5O95196 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.42■■□□□ 1.66
CSPG5O95196 MIR6724-1-201ENST00000616420 92 ntBASIC25.42■■□□□ 1.66
CSPG5O95196 MIR6724-2-201ENST00000616483 92 ntBASIC25.42■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms