Protein–RNA interactions for Protein: O75954

TSPAN9, Tetraspanin-9, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9O75954 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TSPAN9O75954 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
TSPAN9O75954 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TSPAN9O75954 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.13■□□□□ 0.81
TSPAN9O75954 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TSPAN9O75954 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TSPAN9O75954 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
TSPAN9O75954 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
TSPAN9O75954 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TSPAN9O75954 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TSPAN9O75954 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TSPAN9O75954 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TSPAN9O75954 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TSPAN9O75954 AC068473.5-201ENST00000616428 2072 ntBASIC20.12■□□□□ 0.81
TSPAN9O75954 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TSPAN9O75954 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
TSPAN9O75954 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TSPAN9O75954 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TSPAN9O75954 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.11■□□□□ 0.81
TSPAN9O75954 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TSPAN9O75954 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TSPAN9O75954 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TSPAN9O75954 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TSPAN9O75954 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.11■□□□□ 0.81
TSPAN9O75954 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TSPAN9O75954 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.1■□□□□ 0.81
TSPAN9O75954 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TSPAN9O75954 MIR219A2-201ENST00000608502 1504 ntBASIC20.1■□□□□ 0.81
TSPAN9O75954 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TSPAN9O75954 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
TSPAN9O75954 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
TSPAN9O75954 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.1■□□□□ 0.81
TSPAN9O75954 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.09■□□□□ 0.81
TSPAN9O75954 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.09■□□□□ 0.81
TSPAN9O75954 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TSPAN9O75954 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
TSPAN9O75954 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TSPAN9O75954 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
TSPAN9O75954 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.08■□□□□ 0.81
TSPAN9O75954 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.08■□□□□ 0.81
TSPAN9O75954 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.08■□□□□ 0.81
TSPAN9O75954 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.08■□□□□ 0.81
TSPAN9O75954 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TSPAN9O75954 AC060814.1-201ENST00000554326 538 ntBASIC20.08■□□□□ 0.81
TSPAN9O75954 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
TSPAN9O75954 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TSPAN9O75954 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
TSPAN9O75954 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TSPAN9O75954 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TSPAN9O75954 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TSPAN9O75954 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.07■□□□□ 0.8
TSPAN9O75954 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.07■□□□□ 0.8
TSPAN9O75954 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TSPAN9O75954 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TSPAN9O75954 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TSPAN9O75954 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TSPAN9O75954 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TSPAN9O75954 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TSPAN9O75954 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TSPAN9O75954 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TSPAN9O75954 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TSPAN9O75954 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TSPAN9O75954 NTF6A-201ENST00000591175 560 ntBASIC20.06■□□□□ 0.8
TSPAN9O75954 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.06■□□□□ 0.8
TSPAN9O75954 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.06■□□□□ 0.8
TSPAN9O75954 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TSPAN9O75954 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TSPAN9O75954 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TSPAN9O75954 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TSPAN9O75954 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TSPAN9O75954 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TSPAN9O75954 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TSPAN9O75954 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TSPAN9O75954 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TSPAN9O75954 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TSPAN9O75954 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.05■□□□□ 0.8
TSPAN9O75954 AP002414.2-202ENST00000590929 1450 ntBASIC20.05■□□□□ 0.8
TSPAN9O75954 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
TSPAN9O75954 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TSPAN9O75954 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TSPAN9O75954 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TSPAN9O75954 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.04■□□□□ 0.8
TSPAN9O75954 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TSPAN9O75954 C9orf163-202ENST00000624034 2573 ntBASIC20.03■□□□□ 0.8
TSPAN9O75954 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TSPAN9O75954 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TSPAN9O75954 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TSPAN9O75954 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TSPAN9O75954 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TSPAN9O75954 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TSPAN9O75954 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
TSPAN9O75954 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TSPAN9O75954 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
TSPAN9O75954 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TSPAN9O75954 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.02■□□□□ 0.8
TSPAN9O75954 LINC01003-201ENST00000564834 1764 ntBASIC20.02■□□□□ 0.8
TSPAN9O75954 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TSPAN9O75954 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TSPAN9O75954 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TSPAN9O75954 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms