Protein–RNA interactions for Protein: O75679

RFPL3, Ret finger protein-like 3, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3O75679 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
RFPL3O75679 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.18■■□□□ 1.3
RFPL3O75679 BX255925.1-201ENST00000566954 1854 ntBASIC23.17■■□□□ 1.3
RFPL3O75679 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
RFPL3O75679 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
RFPL3O75679 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RFPL3O75679 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.17■■□□□ 1.3
RFPL3O75679 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.17■■□□□ 1.3
RFPL3O75679 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.17■■□□□ 1.3
RFPL3O75679 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.17■■□□□ 1.3
RFPL3O75679 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RFPL3O75679 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.16■■□□□ 1.3
RFPL3O75679 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RFPL3O75679 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RFPL3O75679 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RFPL3O75679 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.16■■□□□ 1.3
RFPL3O75679 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
RFPL3O75679 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RFPL3O75679 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RFPL3O75679 AL121749.1-202ENST00000609313 2153 ntBASIC23.16■■□□□ 1.3
RFPL3O75679 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RFPL3O75679 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RFPL3O75679 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RFPL3O75679 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.15■■□□□ 1.3
RFPL3O75679 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.15■■□□□ 1.3
RFPL3O75679 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.15■■□□□ 1.3
RFPL3O75679 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.15■■□□□ 1.3
RFPL3O75679 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.15■■□□□ 1.3
RFPL3O75679 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
RFPL3O75679 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RFPL3O75679 AL136116.3-201ENST00000402907 1138 ntBASIC23.14■■□□□ 1.29
RFPL3O75679 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RFPL3O75679 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
RFPL3O75679 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
RFPL3O75679 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
RFPL3O75679 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
RFPL3O75679 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
RFPL3O75679 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
RFPL3O75679 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RFPL3O75679 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RFPL3O75679 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RFPL3O75679 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.13■■□□□ 1.29
RFPL3O75679 MIR4281-201ENST00000580852 62 ntBASIC23.13■■□□□ 1.29
RFPL3O75679 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.13■■□□□ 1.29
RFPL3O75679 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.12■■□□□ 1.29
RFPL3O75679 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
RFPL3O75679 LINC01003-201ENST00000564834 1764 ntBASIC23.12■■□□□ 1.29
RFPL3O75679 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
RFPL3O75679 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.12■■□□□ 1.29
RFPL3O75679 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.12■■□□□ 1.29
RFPL3O75679 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RFPL3O75679 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RFPL3O75679 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
RFPL3O75679 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RFPL3O75679 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RFPL3O75679 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.11■■□□□ 1.29
RFPL3O75679 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.11■■□□□ 1.29
RFPL3O75679 AC010997.5-201ENST00000609182 354 ntBASIC23.11■■□□□ 1.29
RFPL3O75679 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RFPL3O75679 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
RFPL3O75679 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RFPL3O75679 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
RFPL3O75679 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.1■■□□□ 1.29
RFPL3O75679 AL117332.1-201ENST00000622628 974 ntBASIC23.1■■□□□ 1.29
RFPL3O75679 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
RFPL3O75679 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RFPL3O75679 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RFPL3O75679 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RFPL3O75679 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.09■■□□□ 1.29
RFPL3O75679 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
RFPL3O75679 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
RFPL3O75679 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RFPL3O75679 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.09■■□□□ 1.29
RFPL3O75679 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
RFPL3O75679 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RFPL3O75679 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RFPL3O75679 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
RFPL3O75679 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.08■■□□□ 1.29
RFPL3O75679 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.08■■□□□ 1.29
RFPL3O75679 MTDHP2-201ENST00000601468 714 ntBASIC23.08■■□□□ 1.29
RFPL3O75679 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.08■■□□□ 1.29
RFPL3O75679 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RFPL3O75679 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
RFPL3O75679 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
RFPL3O75679 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RFPL3O75679 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.07■■□□□ 1.28
RFPL3O75679 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.07■■□□□ 1.28
RFPL3O75679 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.07■■□□□ 1.28
RFPL3O75679 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RFPL3O75679 MIR6724-1-201ENST00000616420 92 ntBASIC23.07■■□□□ 1.28
RFPL3O75679 MIR6724-2-201ENST00000616483 92 ntBASIC23.07■■□□□ 1.28
RFPL3O75679 MIR6724-4-201ENST00000617390 92 ntBASIC23.07■■□□□ 1.28
RFPL3O75679 MIR6724-3-201ENST00000622482 92 ntBASIC23.07■■□□□ 1.28
RFPL3O75679 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RFPL3O75679 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RFPL3O75679 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.06■■□□□ 1.28
RFPL3O75679 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.06■■□□□ 1.28
RFPL3O75679 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.06■■□□□ 1.28
RFPL3O75679 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.06■■□□□ 1.28
RFPL3O75679 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms