Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTP4A3O75365 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PTP4A3O75365 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
PTP4A3O75365 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTP4A3O75365 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.41■■□□□ 1.02
PTP4A3O75365 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PTP4A3O75365 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PTP4A3O75365 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTP4A3O75365 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PTP4A3O75365 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.41■■□□□ 1.02
PTP4A3O75365 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTP4A3O75365 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.41■■□□□ 1.02
PTP4A3O75365 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTP4A3O75365 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTP4A3O75365 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
PTP4A3O75365 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.4■■□□□ 1.02
PTP4A3O75365 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PTP4A3O75365 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PTP4A3O75365 RP9P-202ENST00000450133 1212 ntBASIC21.4■■□□□ 1.02
PTP4A3O75365 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.4■■□□□ 1.02
PTP4A3O75365 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
PTP4A3O75365 LINC01124-201ENST00000409786 2117 ntBASIC21.4■■□□□ 1.02
PTP4A3O75365 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PTP4A3O75365 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.39■■□□□ 1.02
PTP4A3O75365 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
PTP4A3O75365 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.39■■□□□ 1.02
PTP4A3O75365 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PTP4A3O75365 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PTP4A3O75365 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.39■■□□□ 1.01
PTP4A3O75365 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PTP4A3O75365 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
PTP4A3O75365 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PTP4A3O75365 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PTP4A3O75365 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PTP4A3O75365 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PTP4A3O75365 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
PTP4A3O75365 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PTP4A3O75365 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PTP4A3O75365 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PTP4A3O75365 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PTP4A3O75365 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.37■■□□□ 1.01
PTP4A3O75365 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
PTP4A3O75365 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PTP4A3O75365 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PTP4A3O75365 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PTP4A3O75365 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PTP4A3O75365 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PTP4A3O75365 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PTP4A3O75365 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PTP4A3O75365 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
PTP4A3O75365 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PTP4A3O75365 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PTP4A3O75365 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.36■■□□□ 1.01
PTP4A3O75365 AC093536.1-201ENST00000569153 554 ntBASIC21.36■■□□□ 1.01
PTP4A3O75365 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PTP4A3O75365 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.36■■□□□ 1.01
PTP4A3O75365 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PTP4A3O75365 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PTP4A3O75365 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PTP4A3O75365 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PTP4A3O75365 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.36■■□□□ 1.01
PTP4A3O75365 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PTP4A3O75365 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.36■■□□□ 1.01
PTP4A3O75365 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PTP4A3O75365 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PTP4A3O75365 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PTP4A3O75365 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PTP4A3O75365 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.35■■□□□ 1.01
PTP4A3O75365 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PTP4A3O75365 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTP4A3O75365 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.34■■□□□ 1.01
PTP4A3O75365 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
PTP4A3O75365 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.34■■□□□ 1.01
PTP4A3O75365 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTP4A3O75365 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTP4A3O75365 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTP4A3O75365 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTP4A3O75365 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PTP4A3O75365 LINC00543-201ENST00000567234 1845 ntBASIC21.34■■□□□ 1.01
PTP4A3O75365 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTP4A3O75365 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.33■■□□□ 1.01
PTP4A3O75365 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PTP4A3O75365 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PTP4A3O75365 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
PTP4A3O75365 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.33■■□□□ 1.01
PTP4A3O75365 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
PTP4A3O75365 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.32■■□□□ 1
PTP4A3O75365 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.32■■□□□ 1
PTP4A3O75365 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.32■■□□□ 1
PTP4A3O75365 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.32■■□□□ 1
PTP4A3O75365 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.31■■□□□ 1
PTP4A3O75365 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PTP4A3O75365 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PTP4A3O75365 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.31■■□□□ 1
PTP4A3O75365 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PTP4A3O75365 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PTP4A3O75365 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.31■■□□□ 1
PTP4A3O75365 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.31■■□□□ 1
PTP4A3O75365 AC007029.1-201ENST00000604183 313 ntBASIC21.31■■□□□ 1
PTP4A3O75365 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms