Protein–RNA interactions for Protein: O43657

TSPAN6, Tetraspanin-6, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6O43657 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.82■■□□□ 1.4
TSPAN6O43657 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
TSPAN6O43657 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.81■■□□□ 1.4
TSPAN6O43657 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.81■■□□□ 1.4
TSPAN6O43657 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TSPAN6O43657 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TSPAN6O43657 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.8■■□□□ 1.4
TSPAN6O43657 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.8■■□□□ 1.4
TSPAN6O43657 AL592295.1-201ENST00000400984 884 ntBASIC23.8■■□□□ 1.4
TSPAN6O43657 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TSPAN6O43657 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TSPAN6O43657 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
TSPAN6O43657 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.8■■□□□ 1.4
TSPAN6O43657 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TSPAN6O43657 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.8■■□□□ 1.4
TSPAN6O43657 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TSPAN6O43657 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
TSPAN6O43657 KRT18P24-201ENST00000344739 1156 ntBASIC23.79■■□□□ 1.4
TSPAN6O43657 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.79■■□□□ 1.4
TSPAN6O43657 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TSPAN6O43657 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.79■■□□□ 1.4
TSPAN6O43657 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TSPAN6O43657 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TSPAN6O43657 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.79■■□□□ 1.4
TSPAN6O43657 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TSPAN6O43657 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
TSPAN6O43657 AC092803.2-201ENST00000564287 1899 ntBASIC23.78■■□□□ 1.4
TSPAN6O43657 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
TSPAN6O43657 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TSPAN6O43657 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TSPAN6O43657 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TSPAN6O43657 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.77■■□□□ 1.4
TSPAN6O43657 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
TSPAN6O43657 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.77■■□□□ 1.4
TSPAN6O43657 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.77■■□□□ 1.4
TSPAN6O43657 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TSPAN6O43657 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
TSPAN6O43657 ERN1-208ENST00000606895 2068 ntBASIC23.76■■□□□ 1.39
TSPAN6O43657 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
TSPAN6O43657 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
TSPAN6O43657 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.76■■□□□ 1.39
TSPAN6O43657 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
TSPAN6O43657 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
TSPAN6O43657 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TSPAN6O43657 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TSPAN6O43657 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.75■■□□□ 1.39
TSPAN6O43657 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.75■■□□□ 1.39
TSPAN6O43657 THA1P-201ENST00000590384 1145 ntBASIC23.75■■□□□ 1.39
TSPAN6O43657 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.75■■□□□ 1.39
TSPAN6O43657 AC091060.1-201ENST00000623524 1766 ntBASIC23.75■■□□□ 1.39
TSPAN6O43657 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TSPAN6O43657 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
TSPAN6O43657 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TSPAN6O43657 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TSPAN6O43657 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TSPAN6O43657 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
TSPAN6O43657 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.74■■□□□ 1.39
TSPAN6O43657 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TSPAN6O43657 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
TSPAN6O43657 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
TSPAN6O43657 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.74■■□□□ 1.39
TSPAN6O43657 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TSPAN6O43657 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TSPAN6O43657 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.73■■□□□ 1.39
TSPAN6O43657 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TSPAN6O43657 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
TSPAN6O43657 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
TSPAN6O43657 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TSPAN6O43657 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TSPAN6O43657 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TSPAN6O43657 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TSPAN6O43657 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
TSPAN6O43657 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TSPAN6O43657 Z92544.1-202ENST00000571933 1220 ntBASIC23.72■■□□□ 1.39
TSPAN6O43657 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.72■■□□□ 1.39
TSPAN6O43657 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.72■■□□□ 1.39
TSPAN6O43657 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TSPAN6O43657 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TSPAN6O43657 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TSPAN6O43657 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TSPAN6O43657 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TSPAN6O43657 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.71■■□□□ 1.39
TSPAN6O43657 AC120024.1-201ENST00000562672 995 ntBASIC23.71■■□□□ 1.39
TSPAN6O43657 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.71■■□□□ 1.39
TSPAN6O43657 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.71■■□□□ 1.39
TSPAN6O43657 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.7■■□□□ 1.39
TSPAN6O43657 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
TSPAN6O43657 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
TSPAN6O43657 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.7■■□□□ 1.38
TSPAN6O43657 AC010501.1-201ENST00000606270 1962 ntBASIC23.7■■□□□ 1.38
TSPAN6O43657 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.69■■□□□ 1.38
TSPAN6O43657 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.69■■□□□ 1.38
TSPAN6O43657 AC096887.2-201ENST00000623443 1957 ntBASIC23.69■■□□□ 1.38
TSPAN6O43657 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TSPAN6O43657 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TSPAN6O43657 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TSPAN6O43657 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TSPAN6O43657 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TSPAN6O43657 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.68■■□□□ 1.38
TSPAN6O43657 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms