Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC33.83■■■■□ 3.01
CHD2O14647 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC33.83■■■■□ 3.01
CHD2O14647 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
CHD2O14647 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC33.82■■■■□ 3.01
CHD2O14647 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC33.82■■■■□ 3
CHD2O14647 CD72-202ENST00000378430 585 ntTSL 3 BASIC33.82■■■■□ 3
CHD2O14647 AC092666.2-201ENST00000613287 246 ntBASIC33.82■■■■□ 3
CHD2O14647 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC33.82■■■■□ 3
CHD2O14647 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC33.81■■■■□ 3
CHD2O14647 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC33.81■■■■□ 3
CHD2O14647 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC33.81■■■■□ 3
CHD2O14647 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC33.81■■■■□ 3
CHD2O14647 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
CHD2O14647 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC33.81■■■■□ 3
CHD2O14647 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
CHD2O14647 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC33.8■■■■□ 3
CHD2O14647 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC33.8■■■■□ 3
CHD2O14647 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC33.8■■■■□ 3
CHD2O14647 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC33.8■■■■□ 3
CHD2O14647 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC33.8■■■■□ 3
CHD2O14647 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
CHD2O14647 TFPT-201ENST00000391757 774 ntTSL 5 BASIC33.79■■■■□ 3
CHD2O14647 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC33.79■■■■□ 3
CHD2O14647 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC33.79■■■■□ 3
CHD2O14647 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC33.79■■■■□ 3
CHD2O14647 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC33.79■■■■□ 3
CHD2O14647 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC33.79■■■■□ 3
CHD2O14647 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC33.79■■■■□ 3
CHD2O14647 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
CHD2O14647 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
CHD2O14647 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC33.78■■■■□ 3
CHD2O14647 AF131216.4-201ENST00000638924 1588 ntBASIC33.78■■■■□ 3
CHD2O14647 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC33.77■■■■□ 3
CHD2O14647 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC33.76■■■■□ 3
CHD2O14647 GAK-223ENST00000628912 497 ntTSL 5 BASIC33.76■■■■□ 3
CHD2O14647 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
CHD2O14647 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC33.76■■■□□ 2.99
CHD2O14647 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC33.76■■■□□ 2.99
CHD2O14647 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
CHD2O14647 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC33.75■■■□□ 2.99
CHD2O14647 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC33.75■■■□□ 2.99
CHD2O14647 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC33.75■■■□□ 2.99
CHD2O14647 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC33.74■■■□□ 2.99
CHD2O14647 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC33.74■■■□□ 2.99
CHD2O14647 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
CHD2O14647 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC33.74■■■□□ 2.99
CHD2O14647 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC33.74■■■□□ 2.99
CHD2O14647 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC33.74■■■□□ 2.99
CHD2O14647 CLTA-210ENST00000540080 989 ntTSL 2 BASIC33.74■■■□□ 2.99
CHD2O14647 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC33.74■■■□□ 2.99
CHD2O14647 BX255925.1-201ENST00000566954 1854 ntBASIC33.73■■■□□ 2.99
CHD2O14647 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
CHD2O14647 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
CHD2O14647 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
CHD2O14647 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
CHD2O14647 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC33.73■■■□□ 2.99
CHD2O14647 AC142381.2-201ENST00000566120 298 ntBASIC33.73■■■□□ 2.99
CHD2O14647 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC33.73■■■□□ 2.99
CHD2O14647 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
CHD2O14647 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC33.72■■■□□ 2.99
CHD2O14647 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC33.72■■■□□ 2.99
CHD2O14647 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
CHD2O14647 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC33.72■■■□□ 2.99
CHD2O14647 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
CHD2O14647 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
CHD2O14647 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC33.69■■■□□ 2.98
CHD2O14647 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC33.69■■■□□ 2.98
CHD2O14647 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC33.69■■■□□ 2.98
CHD2O14647 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC33.69■■■□□ 2.98
CHD2O14647 PBX2P1-201ENST00000493219 1291 ntBASIC33.69■■■□□ 2.98
CHD2O14647 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC33.69■■■□□ 2.98
CHD2O14647 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC33.69■■■□□ 2.98
CHD2O14647 SNX5-217ENST00000606557 1087 ntBASIC33.68■■■□□ 2.98
CHD2O14647 AC142472.1-201ENST00000612013 1741 ntBASIC33.68■■■□□ 2.98
CHD2O14647 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC33.67■■■□□ 2.98
CHD2O14647 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC33.67■■■□□ 2.98
CHD2O14647 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC33.67■■■□□ 2.98
CHD2O14647 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC33.67■■■□□ 2.98
CHD2O14647 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC33.66■■■□□ 2.98
CHD2O14647 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC33.66■■■□□ 2.98
CHD2O14647 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC33.66■■■□□ 2.98
CHD2O14647 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC33.65■■■□□ 2.98
CHD2O14647 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC33.65■■■□□ 2.98
CHD2O14647 CLTA-206ENST00000466396 695 ntTSL 2 BASIC33.65■■■□□ 2.98
CHD2O14647 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC33.65■■■□□ 2.98
CHD2O14647 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC33.64■■■□□ 2.98
CHD2O14647 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC33.64■■■□□ 2.98
CHD2O14647 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC33.64■■■□□ 2.98
CHD2O14647 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
CHD2O14647 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC33.64■■■□□ 2.98
CHD2O14647 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
CHD2O14647 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC33.64■■■□□ 2.98
CHD2O14647 MIR5787-201ENST00000611784 55 ntBASIC33.63■■■□□ 2.97
CHD2O14647 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC33.63■■■□□ 2.97
CHD2O14647 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC33.63■■■□□ 2.97
CHD2O14647 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
CHD2O14647 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC33.63■■■□□ 2.97
CHD2O14647 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC33.62■■■□□ 2.97
CHD2O14647 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
CHD2O14647 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms