Protein–RNA interactions for Protein: O00567

NOP56, Nucleolar protein 56, humanhuman

Known RBP Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56O00567 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.7■■□□□ 1.86
NOP56O00567 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.69■■□□□ 1.86
NOP56O00567 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
NOP56O00567 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
NOP56O00567 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
NOP56O00567 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.69■■□□□ 1.86
NOP56O00567 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
NOP56O00567 MIR4787-201ENST00000607364 84 ntBASIC26.69■■□□□ 1.86
NOP56O00567 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
NOP56O00567 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
NOP56O00567 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.68■■□□□ 1.86
NOP56O00567 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
NOP56O00567 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
NOP56O00567 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
NOP56O00567 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
NOP56O00567 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26.68■■□□□ 1.86
NOP56O00567 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC26.67■■□□□ 1.86
NOP56O00567 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
NOP56O00567 CREM-229ENST00000474362 1030 ntTSL 2 BASIC26.67■■□□□ 1.86
NOP56O00567 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
NOP56O00567 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.67■■□□□ 1.86
NOP56O00567 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
NOP56O00567 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
NOP56O00567 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
NOP56O00567 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
NOP56O00567 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
NOP56O00567 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
NOP56O00567 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
NOP56O00567 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
NOP56O00567 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
NOP56O00567 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
NOP56O00567 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.65■■□□□ 1.86
NOP56O00567 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.65■■□□□ 1.86
NOP56O00567 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
NOP56O00567 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
NOP56O00567 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
NOP56O00567 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
NOP56O00567 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
NOP56O00567 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.64■■□□□ 1.86
NOP56O00567 AC137630.3-201ENST00000607245 391 ntBASIC26.64■■□□□ 1.86
NOP56O00567 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
NOP56O00567 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
NOP56O00567 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
NOP56O00567 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
NOP56O00567 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.63■■□□□ 1.85
NOP56O00567 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.63■■□□□ 1.85
NOP56O00567 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
NOP56O00567 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
NOP56O00567 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
NOP56O00567 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.62■■□□□ 1.85
NOP56O00567 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
NOP56O00567 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.62■■□□□ 1.85
NOP56O00567 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.62■■□□□ 1.85
NOP56O00567 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.62■■□□□ 1.85
NOP56O00567 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.61■■□□□ 1.85
NOP56O00567 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
NOP56O00567 GRAMD4P7-201ENST00000578182 1232 ntBASIC26.61■■□□□ 1.85
NOP56O00567 MIR4281-201ENST00000580852 62 ntBASIC26.61■■□□□ 1.85
NOP56O00567 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
NOP56O00567 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
NOP56O00567 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC26.61■■□□□ 1.85
NOP56O00567 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
NOP56O00567 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC26.6■■□□□ 1.85
NOP56O00567 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.6■■□□□ 1.85
NOP56O00567 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.6■■□□□ 1.85
NOP56O00567 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
NOP56O00567 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
NOP56O00567 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
NOP56O00567 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
NOP56O00567 AC011551.1-201ENST00000614101 683 ntBASIC26.59■■□□□ 1.85
NOP56O00567 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
NOP56O00567 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
NOP56O00567 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26.58■■□□□ 1.85
NOP56O00567 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.58■■□□□ 1.85
NOP56O00567 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
NOP56O00567 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
NOP56O00567 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26.58■■□□□ 1.85
NOP56O00567 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.58■■□□□ 1.85
NOP56O00567 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
NOP56O00567 AC021242.3-201ENST00000607598 1377 ntBASIC26.58■■□□□ 1.84
NOP56O00567 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
NOP56O00567 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
NOP56O00567 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
NOP56O00567 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
NOP56O00567 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC26.57■■□□□ 1.84
NOP56O00567 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC26.57■■□□□ 1.84
NOP56O00567 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
NOP56O00567 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.56■■□□□ 1.84
NOP56O00567 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
NOP56O00567 ERN1-208ENST00000606895 2068 ntBASIC26.56■■□□□ 1.84
NOP56O00567 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.56■■□□□ 1.84
NOP56O00567 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
NOP56O00567 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
NOP56O00567 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
NOP56O00567 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
NOP56O00567 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.56■■□□□ 1.84
NOP56O00567 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
NOP56O00567 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
NOP56O00567 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
NOP56O00567 FOXO3B-201ENST00000395675 1928 ntBASIC26.55■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms