Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.71■■□□□ 1.23
C1QTNF9BB2RNN3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
C1QTNF9BB2RNN3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
C1QTNF9BB2RNN3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.71■■□□□ 1.23
C1QTNF9BB2RNN3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.71■■□□□ 1.23
C1QTNF9BB2RNN3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
C1QTNF9BB2RNN3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
C1QTNF9BB2RNN3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
C1QTNF9BB2RNN3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
C1QTNF9BB2RNN3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.7■■□□□ 1.22
C1QTNF9BB2RNN3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
C1QTNF9BB2RNN3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.7■■□□□ 1.22
C1QTNF9BB2RNN3 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.7■■□□□ 1.22
C1QTNF9BB2RNN3 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
C1QTNF9BB2RNN3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
C1QTNF9BB2RNN3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.7■■□□□ 1.22
C1QTNF9BB2RNN3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
C1QTNF9BB2RNN3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
C1QTNF9BB2RNN3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
C1QTNF9BB2RNN3 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
C1QTNF9BB2RNN3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC22.68■■□□□ 1.22
C1QTNF9BB2RNN3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.68■■□□□ 1.22
C1QTNF9BB2RNN3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
C1QTNF9BB2RNN3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
C1QTNF9BB2RNN3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.68■■□□□ 1.22
C1QTNF9BB2RNN3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
C1QTNF9BB2RNN3 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
C1QTNF9BB2RNN3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
C1QTNF9BB2RNN3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
C1QTNF9BB2RNN3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
C1QTNF9BB2RNN3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.67■■□□□ 1.22
C1QTNF9BB2RNN3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
C1QTNF9BB2RNN3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
C1QTNF9BB2RNN3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.67■■□□□ 1.22
C1QTNF9BB2RNN3 IKBKGP1-201ENST00000612193 1073 ntBASIC22.67■■□□□ 1.22
C1QTNF9BB2RNN3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
C1QTNF9BB2RNN3 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
C1QTNF9BB2RNN3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
C1QTNF9BB2RNN3 MIR939-201ENST00000401314 82 ntBASIC22.66■■□□□ 1.22
C1QTNF9BB2RNN3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.66■■□□□ 1.22
C1QTNF9BB2RNN3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
C1QTNF9BB2RNN3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
C1QTNF9BB2RNN3 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
C1QTNF9BB2RNN3 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
C1QTNF9BB2RNN3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
C1QTNF9BB2RNN3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.65■■□□□ 1.22
C1QTNF9BB2RNN3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.65■■□□□ 1.22
C1QTNF9BB2RNN3 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
C1QTNF9BB2RNN3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
C1QTNF9BB2RNN3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.64■■□□□ 1.21
C1QTNF9BB2RNN3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.64■■□□□ 1.21
C1QTNF9BB2RNN3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC22.64■■□□□ 1.21
C1QTNF9BB2RNN3 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.64■■□□□ 1.21
C1QTNF9BB2RNN3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
C1QTNF9BB2RNN3 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
C1QTNF9BB2RNN3 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
C1QTNF9BB2RNN3 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
C1QTNF9BB2RNN3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
C1QTNF9BB2RNN3 AP001330.3-201ENST00000520123 633 ntBASIC22.63■■□□□ 1.21
C1QTNF9BB2RNN3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
C1QTNF9BB2RNN3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
C1QTNF9BB2RNN3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
C1QTNF9BB2RNN3 AP002414.2-202ENST00000590929 1450 ntBASIC22.62■■□□□ 1.21
C1QTNF9BB2RNN3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
C1QTNF9BB2RNN3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.62■■□□□ 1.21
C1QTNF9BB2RNN3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.62■■□□□ 1.21
C1QTNF9BB2RNN3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
C1QTNF9BB2RNN3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
C1QTNF9BB2RNN3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
C1QTNF9BB2RNN3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
C1QTNF9BB2RNN3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
C1QTNF9BB2RNN3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
C1QTNF9BB2RNN3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.6■■□□□ 1.21
C1QTNF9BB2RNN3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.6■■□□□ 1.21
C1QTNF9BB2RNN3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.6■■□□□ 1.21
C1QTNF9BB2RNN3 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
C1QTNF9BB2RNN3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
C1QTNF9BB2RNN3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.6■■□□□ 1.21
C1QTNF9BB2RNN3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.59■■□□□ 1.21
C1QTNF9BB2RNN3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
C1QTNF9BB2RNN3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.59■■□□□ 1.21
C1QTNF9BB2RNN3 SRD5A1P1-201ENST00000442297 786 ntBASIC22.59■■□□□ 1.21
C1QTNF9BB2RNN3 AC091305.1-201ENST00000479476 895 ntBASIC22.59■■□□□ 1.21
C1QTNF9BB2RNN3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.59■■□□□ 1.21
C1QTNF9BB2RNN3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.59■■□□□ 1.21
C1QTNF9BB2RNN3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.58■■□□□ 1.21
C1QTNF9BB2RNN3 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
C1QTNF9BB2RNN3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
C1QTNF9BB2RNN3 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.58■■□□□ 1.21
C1QTNF9BB2RNN3 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
C1QTNF9BB2RNN3 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
C1QTNF9BB2RNN3 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
C1QTNF9BB2RNN3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
C1QTNF9BB2RNN3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.57■■□□□ 1.2
C1QTNF9BB2RNN3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
C1QTNF9BB2RNN3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
C1QTNF9BB2RNN3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
C1QTNF9BB2RNN3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
C1QTNF9BB2RNN3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
C1QTNF9BB2RNN3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms