Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC26.35■■□□□ 1.81
SPDYE4A6NLX3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.35■■□□□ 1.81
SPDYE4A6NLX3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SPDYE4A6NLX3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SPDYE4A6NLX3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
SPDYE4A6NLX3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
SPDYE4A6NLX3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
SPDYE4A6NLX3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.34■■□□□ 1.81
SPDYE4A6NLX3 AC093536.1-201ENST00000569153 554 ntBASIC26.34■■□□□ 1.81
SPDYE4A6NLX3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC26.34■■□□□ 1.81
SPDYE4A6NLX3 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SPDYE4A6NLX3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.34■■□□□ 1.81
SPDYE4A6NLX3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SPDYE4A6NLX3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SPDYE4A6NLX3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SPDYE4A6NLX3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SPDYE4A6NLX3 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.33■■□□□ 1.81
SPDYE4A6NLX3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC26.33■■□□□ 1.81
SPDYE4A6NLX3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SPDYE4A6NLX3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
SPDYE4A6NLX3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SPDYE4A6NLX3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SPDYE4A6NLX3 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.33■■□□□ 1.81
SPDYE4A6NLX3 DUX4L9-201ENST00000449051 1259 ntBASIC26.33■■□□□ 1.81
SPDYE4A6NLX3 AC139795.1-202ENST00000500444 432 ntBASIC26.33■■□□□ 1.81
SPDYE4A6NLX3 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC26.33■■□□□ 1.81
SPDYE4A6NLX3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
SPDYE4A6NLX3 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
SPDYE4A6NLX3 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.8
SPDYE4A6NLX3 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC26.33■■□□□ 1.8
SPDYE4A6NLX3 AC012676.1-201ENST00000574705 1949 ntBASIC26.32■■□□□ 1.8
SPDYE4A6NLX3 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SPDYE4A6NLX3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SPDYE4A6NLX3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
SPDYE4A6NLX3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC26.32■■□□□ 1.8
SPDYE4A6NLX3 KRT8P33-201ENST00000508125 1423 ntBASIC26.31■■□□□ 1.8
SPDYE4A6NLX3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SPDYE4A6NLX3 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC26.31■■□□□ 1.8
SPDYE4A6NLX3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC26.31■■□□□ 1.8
SPDYE4A6NLX3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
SPDYE4A6NLX3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
SPDYE4A6NLX3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
SPDYE4A6NLX3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SPDYE4A6NLX3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.3■■□□□ 1.8
SPDYE4A6NLX3 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SPDYE4A6NLX3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SPDYE4A6NLX3 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SPDYE4A6NLX3 AL035685.1-201ENST00000636663 812 ntBASIC26.3■■□□□ 1.8
SPDYE4A6NLX3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC26.29■■□□□ 1.8
SPDYE4A6NLX3 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC26.29■■□□□ 1.8
SPDYE4A6NLX3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SPDYE4A6NLX3 AC025884.2-201ENST00000553429 711 ntBASIC26.29■■□□□ 1.8
SPDYE4A6NLX3 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SPDYE4A6NLX3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SPDYE4A6NLX3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.29■■□□□ 1.8
SPDYE4A6NLX3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SPDYE4A6NLX3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC26.28■■□□□ 1.8
SPDYE4A6NLX3 AC010980.1-201ENST00000587192 1142 ntBASIC26.28■■□□□ 1.8
SPDYE4A6NLX3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SPDYE4A6NLX3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SPDYE4A6NLX3 ERN1-208ENST00000606895 2068 ntBASIC26.27■■□□□ 1.8
SPDYE4A6NLX3 AL451085.2-201ENST00000605085 799 ntBASIC26.27■■□□□ 1.8
SPDYE4A6NLX3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SPDYE4A6NLX3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SPDYE4A6NLX3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC26.26■■□□□ 1.79
SPDYE4A6NLX3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.26■■□□□ 1.79
SPDYE4A6NLX3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.26■■□□□ 1.79
SPDYE4A6NLX3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SPDYE4A6NLX3 MIR3960-201ENST00000583311 91 ntBASIC26.26■■□□□ 1.79
SPDYE4A6NLX3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SPDYE4A6NLX3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SPDYE4A6NLX3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC26.26■■□□□ 1.79
SPDYE4A6NLX3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SPDYE4A6NLX3 HYI-210ENST00000486909 905 ntTSL 5 BASIC26.25■■□□□ 1.79
SPDYE4A6NLX3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SPDYE4A6NLX3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC26.25■■□□□ 1.79
SPDYE4A6NLX3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
SPDYE4A6NLX3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SPDYE4A6NLX3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.25■■□□□ 1.79
SPDYE4A6NLX3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.25■■□□□ 1.79
SPDYE4A6NLX3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SPDYE4A6NLX3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SPDYE4A6NLX3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SPDYE4A6NLX3 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC26.24■■□□□ 1.79
SPDYE4A6NLX3 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
SPDYE4A6NLX3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SPDYE4A6NLX3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC26.24■■□□□ 1.79
SPDYE4A6NLX3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.24■■□□□ 1.79
SPDYE4A6NLX3 DUSP8P4-201ENST00000399538 1761 ntBASIC26.23■■□□□ 1.79
SPDYE4A6NLX3 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC26.23■■□□□ 1.79
SPDYE4A6NLX3 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
SPDYE4A6NLX3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.23■■□□□ 1.79
SPDYE4A6NLX3 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
SPDYE4A6NLX3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.23■■□□□ 1.79
SPDYE4A6NLX3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
SPDYE4A6NLX3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.22■■□□□ 1.79
SPDYE4A6NLX3 YBX1P4-201ENST00000392794 808 ntBASIC26.22■■□□□ 1.79
SPDYE4A6NLX3 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
SPDYE4A6NLX3 MIR6765-201ENST00000614092 87 ntBASIC26.22■■□□□ 1.79
SPDYE4A6NLX3 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms