Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.88■■□□□ 1.09
SH3D21A4FU49 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.87■■□□□ 1.09
SH3D21A4FU49 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.87■■□□□ 1.09
SH3D21A4FU49 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.87■■□□□ 1.09
SH3D21A4FU49 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.87■■□□□ 1.09
SH3D21A4FU49 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.87■■□□□ 1.09
SH3D21A4FU49 TSPY13P-201ENST00000338964 914 ntBASIC21.87■■□□□ 1.09
SH3D21A4FU49 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.87■■□□□ 1.09
SH3D21A4FU49 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.87■■□□□ 1.09
SH3D21A4FU49 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SH3D21A4FU49 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.86■■□□□ 1.09
SH3D21A4FU49 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SH3D21A4FU49 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
SH3D21A4FU49 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SH3D21A4FU49 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SH3D21A4FU49 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SH3D21A4FU49 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SH3D21A4FU49 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH3D21A4FU49 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
SH3D21A4FU49 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH3D21A4FU49 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SH3D21A4FU49 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH3D21A4FU49 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH3D21A4FU49 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH3D21A4FU49 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.85■■□□□ 1.09
SH3D21A4FU49 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.85■■□□□ 1.09
SH3D21A4FU49 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
SH3D21A4FU49 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH3D21A4FU49 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH3D21A4FU49 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
SH3D21A4FU49 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SH3D21A4FU49 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
SH3D21A4FU49 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.84■■□□□ 1.09
SH3D21A4FU49 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SH3D21A4FU49 AC004987.1-201ENST00000428627 508 ntBASIC21.84■■□□□ 1.09
SH3D21A4FU49 ATP5G2P3-201ENST00000429083 425 ntBASIC21.84■■□□□ 1.09
SH3D21A4FU49 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.84■■□□□ 1.09
SH3D21A4FU49 AC007029.1-201ENST00000604183 313 ntBASIC21.84■■□□□ 1.09
SH3D21A4FU49 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SH3D21A4FU49 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SH3D21A4FU49 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SH3D21A4FU49 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
SH3D21A4FU49 AL359258.2-201ENST00000564063 1566 ntBASIC21.83■■□□□ 1.09
SH3D21A4FU49 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SH3D21A4FU49 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SH3D21A4FU49 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SH3D21A4FU49 AC096887.2-201ENST00000623443 1957 ntBASIC21.83■■□□□ 1.08
SH3D21A4FU49 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SH3D21A4FU49 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SH3D21A4FU49 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SH3D21A4FU49 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.82■■□□□ 1.08
SH3D21A4FU49 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.82■■□□□ 1.08
SH3D21A4FU49 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SH3D21A4FU49 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.82■■□□□ 1.08
SH3D21A4FU49 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.82■■□□□ 1.08
SH3D21A4FU49 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
SH3D21A4FU49 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
SH3D21A4FU49 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SH3D21A4FU49 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.81■■□□□ 1.08
SH3D21A4FU49 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SH3D21A4FU49 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SH3D21A4FU49 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.81■■□□□ 1.08
SH3D21A4FU49 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SH3D21A4FU49 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SH3D21A4FU49 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.8■■□□□ 1.08
SH3D21A4FU49 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SH3D21A4FU49 AC012676.1-201ENST00000574705 1949 ntBASIC21.8■■□□□ 1.08
SH3D21A4FU49 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SH3D21A4FU49 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SH3D21A4FU49 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SH3D21A4FU49 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SH3D21A4FU49 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SH3D21A4FU49 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
SH3D21A4FU49 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3D21A4FU49 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
SH3D21A4FU49 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3D21A4FU49 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.79■■□□□ 1.08
SH3D21A4FU49 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3D21A4FU49 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3D21A4FU49 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3D21A4FU49 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3D21A4FU49 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3D21A4FU49 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SH3D21A4FU49 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.79■■□□□ 1.08
SH3D21A4FU49 SMPD5-203ENST00000639008 1464 ntBASIC21.78■■□□□ 1.08
SH3D21A4FU49 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH3D21A4FU49 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.78■■□□□ 1.08
SH3D21A4FU49 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH3D21A4FU49 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.78■■□□□ 1.08
SH3D21A4FU49 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.78■■□□□ 1.08
SH3D21A4FU49 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH3D21A4FU49 AP003733.4-201ENST00000623785 1697 ntBASIC21.78■■□□□ 1.08
SH3D21A4FU49 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SH3D21A4FU49 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SH3D21A4FU49 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.78■■□□□ 1.08
SH3D21A4FU49 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SH3D21A4FU49 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH3D21A4FU49 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH3D21A4FU49 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH3D21A4FU49 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms