Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC35.62■■■■□ 3.29
HFM1A2PYH4 AC022616.5-201ENST00000518796 181 ntBASIC35.62■■■■□ 3.29
HFM1A2PYH4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC35.62■■■■□ 3.29
HFM1A2PYH4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC35.62■■■■□ 3.29
HFM1A2PYH4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
HFM1A2PYH4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
HFM1A2PYH4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC35.61■■■■□ 3.29
HFM1A2PYH4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC35.61■■■■□ 3.29
HFM1A2PYH4 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
HFM1A2PYH4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC35.6■■■■□ 3.29
HFM1A2PYH4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC35.59■■■■□ 3.29
HFM1A2PYH4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
HFM1A2PYH4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC35.59■■■■□ 3.29
HFM1A2PYH4 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC35.59■■■■□ 3.29
HFM1A2PYH4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
HFM1A2PYH4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC35.59■■■■□ 3.29
HFM1A2PYH4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC35.59■■■■□ 3.29
HFM1A2PYH4 AC091060.1-201ENST00000623524 1766 ntBASIC35.59■■■■□ 3.29
HFM1A2PYH4 AL035685.1-201ENST00000636663 812 ntBASIC35.58■■■■□ 3.29
HFM1A2PYH4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC35.58■■■■□ 3.29
HFM1A2PYH4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC35.58■■■■□ 3.29
HFM1A2PYH4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC35.58■■■■□ 3.29
HFM1A2PYH4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC35.57■■■■□ 3.29
HFM1A2PYH4 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC35.57■■■■□ 3.28
HFM1A2PYH4 AC009299.2-201ENST00000482477 511 ntBASIC35.57■■■■□ 3.28
HFM1A2PYH4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC35.56■■■■□ 3.28
HFM1A2PYH4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC35.56■■■■□ 3.28
HFM1A2PYH4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC35.56■■■■□ 3.28
HFM1A2PYH4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
HFM1A2PYH4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC35.55■■■■□ 3.28
HFM1A2PYH4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC35.55■■■■□ 3.28
HFM1A2PYH4 AL031848.2-201ENST00000607670 837 ntBASIC35.55■■■■□ 3.28
HFM1A2PYH4 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC35.55■■■■□ 3.28
HFM1A2PYH4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
HFM1A2PYH4 AC097639.1-201ENST00000565519 1891 ntBASIC35.54■■■■□ 3.28
HFM1A2PYH4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
HFM1A2PYH4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
HFM1A2PYH4 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC35.54■■■■□ 3.28
HFM1A2PYH4 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC35.54■■■■□ 3.28
HFM1A2PYH4 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
HFM1A2PYH4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
HFM1A2PYH4 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC35.53■■■■□ 3.28
HFM1A2PYH4 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
HFM1A2PYH4 PRTG-204ENST00000561292 833 ntTSL 3 BASIC35.53■■■■□ 3.28
HFM1A2PYH4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
HFM1A2PYH4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC35.53■■■■□ 3.28
HFM1A2PYH4 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC35.53■■■■□ 3.28
HFM1A2PYH4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC35.52■■■■□ 3.28
HFM1A2PYH4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
HFM1A2PYH4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC35.51■■■■□ 3.28
HFM1A2PYH4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC35.51■■■■□ 3.28
HFM1A2PYH4 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.27
HFM1A2PYH4 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC35.5■■■■□ 3.27
HFM1A2PYH4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC35.5■■■■□ 3.27
HFM1A2PYH4 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC35.5■■■■□ 3.27
HFM1A2PYH4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC35.5■■■■□ 3.27
HFM1A2PYH4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC35.5■■■■□ 3.27
HFM1A2PYH4 AC145676.1-201ENST00000514988 2004 ntBASIC35.5■■■■□ 3.27
HFM1A2PYH4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
HFM1A2PYH4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC35.49■■■■□ 3.27
HFM1A2PYH4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC35.49■■■■□ 3.27
HFM1A2PYH4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC35.49■■■■□ 3.27
HFM1A2PYH4 AL592295.1-201ENST00000400984 884 ntBASIC35.49■■■■□ 3.27
HFM1A2PYH4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
HFM1A2PYH4 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC35.48■■■■□ 3.27
HFM1A2PYH4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC35.48■■■■□ 3.27
HFM1A2PYH4 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
HFM1A2PYH4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
HFM1A2PYH4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC35.46■■■■□ 3.27
HFM1A2PYH4 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC35.46■■■■□ 3.27
HFM1A2PYH4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
HFM1A2PYH4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC35.46■■■■□ 3.27
HFM1A2PYH4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC35.46■■■■□ 3.27
HFM1A2PYH4 FOXO3B-201ENST00000395675 1928 ntBASIC35.46■■■■□ 3.27
HFM1A2PYH4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC35.46■■■■□ 3.27
HFM1A2PYH4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC35.45■■■■□ 3.27
HFM1A2PYH4 KRT18P24-201ENST00000344739 1156 ntBASIC35.45■■■■□ 3.27
HFM1A2PYH4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
HFM1A2PYH4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
HFM1A2PYH4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC35.44■■■■□ 3.26
HFM1A2PYH4 AC011551.1-201ENST00000614101 683 ntBASIC35.44■■■■□ 3.26
HFM1A2PYH4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC35.44■■■■□ 3.26
HFM1A2PYH4 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC35.44■■■■□ 3.26
HFM1A2PYH4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
HFM1A2PYH4 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
HFM1A2PYH4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC35.43■■■■□ 3.26
HFM1A2PYH4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC35.43■■■■□ 3.26
HFM1A2PYH4 AC120024.1-201ENST00000562672 995 ntBASIC35.43■■■■□ 3.26
HFM1A2PYH4 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC35.43■■■■□ 3.26
HFM1A2PYH4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC35.43■■■■□ 3.26
HFM1A2PYH4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
HFM1A2PYH4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
HFM1A2PYH4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC35.41■■■■□ 3.26
HFM1A2PYH4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
HFM1A2PYH4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
HFM1A2PYH4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC35.4■■■■□ 3.26
HFM1A2PYH4 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
HFM1A2PYH4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
HFM1A2PYH4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC35.4■■■■□ 3.26
HFM1A2PYH4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC35.39■■■■□ 3.26
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms