Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV34A0A0B4J273 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV34A0A0B4J273 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
TRAV34A0A0B4J273 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV34A0A0B4J273 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV34A0A0B4J273 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV34A0A0B4J273 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV34A0A0B4J273 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV34A0A0B4J273 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV34A0A0B4J273 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV34A0A0B4J273 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV34A0A0B4J273 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV34A0A0B4J273 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
TRAV34A0A0B4J273 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV34A0A0B4J273 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV34A0A0B4J273 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC18.19■□□□□ 0.5
TRAV34A0A0B4J273 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAV34A0A0B4J273 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV34A0A0B4J273 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV34A0A0B4J273 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV34A0A0B4J273 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRAV34A0A0B4J273 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TRAV34A0A0B4J273 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV34A0A0B4J273 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
TRAV34A0A0B4J273 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TRAV34A0A0B4J273 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.18■□□□□ 0.5
TRAV34A0A0B4J273 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV34A0A0B4J273 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
TRAV34A0A0B4J273 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV34A0A0B4J273 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAV34A0A0B4J273 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV34A0A0B4J273 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.17■□□□□ 0.5
TRAV34A0A0B4J273 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV34A0A0B4J273 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.17■□□□□ 0.5
TRAV34A0A0B4J273 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV34A0A0B4J273 LINC00543-201ENST00000567234 1845 ntBASIC18.17■□□□□ 0.5
TRAV34A0A0B4J273 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC18.17■□□□□ 0.5
TRAV34A0A0B4J273 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV34A0A0B4J273 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV34A0A0B4J273 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV34A0A0B4J273 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV34A0A0B4J273 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV34A0A0B4J273 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV34A0A0B4J273 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV34A0A0B4J273 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV34A0A0B4J273 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.16■□□□□ 0.5
TRAV34A0A0B4J273 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV34A0A0B4J273 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV34A0A0B4J273 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV34A0A0B4J273 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV34A0A0B4J273 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV34A0A0B4J273 AP003733.4-201ENST00000623785 1697 ntBASIC18.15■□□□□ 0.5
TRAV34A0A0B4J273 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TRAV34A0A0B4J273 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TRAV34A0A0B4J273 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV34A0A0B4J273 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV34A0A0B4J273 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV34A0A0B4J273 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV34A0A0B4J273 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV34A0A0B4J273 AC012676.1-201ENST00000574705 1949 ntBASIC18.15■□□□□ 0.5
TRAV34A0A0B4J273 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV34A0A0B4J273 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV34A0A0B4J273 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV34A0A0B4J273 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
TRAV34A0A0B4J273 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRAV34A0A0B4J273 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.14■□□□□ 0.49
TRAV34A0A0B4J273 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC18.14■□□□□ 0.49
TRAV34A0A0B4J273 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC18.14■□□□□ 0.49
TRAV34A0A0B4J273 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.14■□□□□ 0.49
TRAV34A0A0B4J273 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV34A0A0B4J273 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TRAV34A0A0B4J273 AC097639.1-201ENST00000565519 1891 ntBASIC18.14■□□□□ 0.49
TRAV34A0A0B4J273 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.13■□□□□ 0.49
TRAV34A0A0B4J273 PKD1P6-201ENST00000343738 4769 ntBASIC18.13■□□□□ 0.49
TRAV34A0A0B4J273 AC068473.5-201ENST00000616428 2072 ntBASIC18.13■□□□□ 0.49
TRAV34A0A0B4J273 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV34A0A0B4J273 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC18.13■□□□□ 0.49
TRAV34A0A0B4J273 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV34A0A0B4J273 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAV34A0A0B4J273 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TRAV34A0A0B4J273 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV34A0A0B4J273 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV34A0A0B4J273 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV34A0A0B4J273 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
TRAV34A0A0B4J273 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC18.12■□□□□ 0.49
TRAV34A0A0B4J273 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV34A0A0B4J273 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV34A0A0B4J273 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV34A0A0B4J273 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV34A0A0B4J273 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRAV34A0A0B4J273 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV34A0A0B4J273 AC087741.3-201ENST00000624270 1347 ntBASIC18.11■□□□□ 0.49
TRAV34A0A0B4J273 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV34A0A0B4J273 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRAV34A0A0B4J273 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV34A0A0B4J273 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV34A0A0B4J273 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV34A0A0B4J273 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV34A0A0B4J273 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV34A0A0B4J273 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms