Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
RCL1Q9Y2P8 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RCL1Q9Y2P8 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
RCL1Q9Y2P8 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC13.53□□□□□ -0.24
RCL1Q9Y2P8 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RCL1Q9Y2P8 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC13.53□□□□□ -0.24
RCL1Q9Y2P8 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.53□□□□□ -0.24
RCL1Q9Y2P8 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC13.53□□□□□ -0.24
RCL1Q9Y2P8 AC124864.1-201ENST00000623408 392 ntBASIC13.53□□□□□ -0.24
RCL1Q9Y2P8 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC13.53□□□□□ -0.24
RCL1Q9Y2P8 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
RCL1Q9Y2P8 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.53□□□□□ -0.24
RCL1Q9Y2P8 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RCL1Q9Y2P8 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RCL1Q9Y2P8 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RCL1Q9Y2P8 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RCL1Q9Y2P8 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RCL1Q9Y2P8 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RCL1Q9Y2P8 FAM45BP-202ENST00000592932 1624 ntBASIC13.53□□□□□ -0.24
RCL1Q9Y2P8 AL009178.2-201ENST00000597278 2719 ntBASIC13.53□□□□□ -0.24
RCL1Q9Y2P8 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RCL1Q9Y2P8 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RCL1Q9Y2P8 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RCL1Q9Y2P8 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RCL1Q9Y2P8 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RCL1Q9Y2P8 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RCL1Q9Y2P8 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RCL1Q9Y2P8 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RCL1Q9Y2P8 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RCL1Q9Y2P8 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RCL1Q9Y2P8 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
RCL1Q9Y2P8 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.52□□□□□ -0.24
RCL1Q9Y2P8 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.52□□□□□ -0.24
RCL1Q9Y2P8 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
RCL1Q9Y2P8 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.52□□□□□ -0.24
RCL1Q9Y2P8 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RCL1Q9Y2P8 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RCL1Q9Y2P8 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RCL1Q9Y2P8 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.52□□□□□ -0.24
RCL1Q9Y2P8 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RCL1Q9Y2P8 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RCL1Q9Y2P8 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RCL1Q9Y2P8 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RCL1Q9Y2P8 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RCL1Q9Y2P8 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RCL1Q9Y2P8 CD9-202ENST00000382515 1229 ntTSL 5 BASIC13.52□□□□□ -0.25
RCL1Q9Y2P8 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RCL1Q9Y2P8 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
RCL1Q9Y2P8 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
RCL1Q9Y2P8 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RCL1Q9Y2P8 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RCL1Q9Y2P8 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC13.52□□□□□ -0.25
RCL1Q9Y2P8 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC13.52□□□□□ -0.25
RCL1Q9Y2P8 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.52□□□□□ -0.25
RCL1Q9Y2P8 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.52□□□□□ -0.25
RCL1Q9Y2P8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
RCL1Q9Y2P8 AC148477.5-201ENST00000625164 1645 ntBASIC13.52□□□□□ -0.25
RCL1Q9Y2P8 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.52□□□□□ -0.25
RCL1Q9Y2P8 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.52□□□□□ -0.25
RCL1Q9Y2P8 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.52□□□□□ -0.25
RCL1Q9Y2P8 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
RCL1Q9Y2P8 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RCL1Q9Y2P8 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
RCL1Q9Y2P8 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.52□□□□□ -0.25
RCL1Q9Y2P8 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
RCL1Q9Y2P8 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.52□□□□□ -0.25
RCL1Q9Y2P8 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RCL1Q9Y2P8 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RCL1Q9Y2P8 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
RCL1Q9Y2P8 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RCL1Q9Y2P8 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.52□□□□□ -0.25
RCL1Q9Y2P8 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
RCL1Q9Y2P8 PCDHA3-202ENST00000532566 4594 ntBASIC13.52□□□□□ -0.25
RCL1Q9Y2P8 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
RCL1Q9Y2P8 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC13.51□□□□□ -0.25
RCL1Q9Y2P8 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms