Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.71■□□□□ 0.43
SSX2IPQ9Y2D8 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSX2IPQ9Y2D8 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSX2IPQ9Y2D8 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSX2IPQ9Y2D8 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSX2IPQ9Y2D8 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.71■□□□□ 0.43
SSX2IPQ9Y2D8 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.71■□□□□ 0.43
SSX2IPQ9Y2D8 LINC00895-201ENST00000629028 1637 ntBASIC17.71■□□□□ 0.43
SSX2IPQ9Y2D8 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.71■□□□□ 0.43
SSX2IPQ9Y2D8 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SSX2IPQ9Y2D8 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.71■□□□□ 0.43
SSX2IPQ9Y2D8 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSX2IPQ9Y2D8 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SSX2IPQ9Y2D8 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SSX2IPQ9Y2D8 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SSX2IPQ9Y2D8 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.71■□□□□ 0.42
SSX2IPQ9Y2D8 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.71■□□□□ 0.42
SSX2IPQ9Y2D8 AC063926.2-201ENST00000623766 1308 ntBASIC17.71■□□□□ 0.42
SSX2IPQ9Y2D8 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
SSX2IPQ9Y2D8 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.71■□□□□ 0.42
SSX2IPQ9Y2D8 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
SSX2IPQ9Y2D8 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSX2IPQ9Y2D8 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
SSX2IPQ9Y2D8 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SSX2IPQ9Y2D8 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SSX2IPQ9Y2D8 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSX2IPQ9Y2D8 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SSX2IPQ9Y2D8 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SSX2IPQ9Y2D8 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SSX2IPQ9Y2D8 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.7■□□□□ 0.42
SSX2IPQ9Y2D8 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.7■□□□□ 0.42
SSX2IPQ9Y2D8 AC244107.1-201ENST00000442033 332 ntBASIC17.7■□□□□ 0.42
SSX2IPQ9Y2D8 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.7■□□□□ 0.42
SSX2IPQ9Y2D8 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.7■□□□□ 0.42
SSX2IPQ9Y2D8 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.7■□□□□ 0.42
SSX2IPQ9Y2D8 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.7■□□□□ 0.42
SSX2IPQ9Y2D8 AC027307.3-201ENST00000594262 1100 ntBASIC17.7■□□□□ 0.42
SSX2IPQ9Y2D8 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSX2IPQ9Y2D8 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.7■□□□□ 0.42
SSX2IPQ9Y2D8 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSX2IPQ9Y2D8 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SSX2IPQ9Y2D8 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
SSX2IPQ9Y2D8 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.7■□□□□ 0.42
SSX2IPQ9Y2D8 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SSX2IPQ9Y2D8 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SSX2IPQ9Y2D8 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 AL139384.1-201ENST00000612143 3047 ntBASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 AC092580.3-201ENST00000430932 139 ntBASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 AC027369.6-201ENST00000525520 931 ntBASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 AC007967.4-201ENST00000614700 386 ntBASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 AP3S2-216ENST00000617003 1561 ntBASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSX2IPQ9Y2D8 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SSX2IPQ9Y2D8 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SSX2IPQ9Y2D8 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSX2IPQ9Y2D8 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SSX2IPQ9Y2D8 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSX2IPQ9Y2D8 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SSX2IPQ9Y2D8 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.68■□□□□ 0.42
SSX2IPQ9Y2D8 AC022211.2-201ENST00000585075 2527 ntBASIC17.68■□□□□ 0.42
SSX2IPQ9Y2D8 AL035456.1-201ENST00000456064 1369 ntBASIC17.68■□□□□ 0.42
SSX2IPQ9Y2D8 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SSX2IPQ9Y2D8 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms