Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PNMA3Q9UL41 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PNMA3Q9UL41 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PNMA3Q9UL41 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.84■□□□□ 0.61
PNMA3Q9UL41 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
PNMA3Q9UL41 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PNMA3Q9UL41 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PNMA3Q9UL41 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.84■□□□□ 0.61
PNMA3Q9UL41 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PNMA3Q9UL41 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.84■□□□□ 0.61
PNMA3Q9UL41 AL139010.1-201ENST00000454878 894 ntBASIC18.84■□□□□ 0.61
PNMA3Q9UL41 AC022494.1-201ENST00000466044 728 ntBASIC18.84■□□□□ 0.61
PNMA3Q9UL41 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18.84■□□□□ 0.61
PNMA3Q9UL41 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PNMA3Q9UL41 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.84■□□□□ 0.61
PNMA3Q9UL41 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.84■□□□□ 0.61
PNMA3Q9UL41 AC123567.1-201ENST00000548294 1261 ntBASIC18.84■□□□□ 0.61
PNMA3Q9UL41 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PNMA3Q9UL41 AC093726.1-201ENST00000608064 963 ntBASIC18.84■□□□□ 0.61
PNMA3Q9UL41 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.84■□□□□ 0.61
PNMA3Q9UL41 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.84■□□□□ 0.61
PNMA3Q9UL41 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.84■□□□□ 0.61
PNMA3Q9UL41 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
PNMA3Q9UL41 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PNMA3Q9UL41 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PNMA3Q9UL41 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PNMA3Q9UL41 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PNMA3Q9UL41 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PNMA3Q9UL41 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
PNMA3Q9UL41 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.83■□□□□ 0.61
PNMA3Q9UL41 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
PNMA3Q9UL41 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
PNMA3Q9UL41 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PNMA3Q9UL41 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PNMA3Q9UL41 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PNMA3Q9UL41 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PNMA3Q9UL41 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
PNMA3Q9UL41 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
PNMA3Q9UL41 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.83■□□□□ 0.61
PNMA3Q9UL41 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.83■□□□□ 0.61
PNMA3Q9UL41 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.83■□□□□ 0.61
PNMA3Q9UL41 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.83■□□□□ 0.61
PNMA3Q9UL41 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PNMA3Q9UL41 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PNMA3Q9UL41 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.83■□□□□ 0.6
PNMA3Q9UL41 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.83■□□□□ 0.6
PNMA3Q9UL41 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.83■□□□□ 0.6
PNMA3Q9UL41 STK33P1-201ENST00000423835 1218 ntBASIC18.83■□□□□ 0.6
PNMA3Q9UL41 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PNMA3Q9UL41 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PNMA3Q9UL41 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PNMA3Q9UL41 AC023310.3-201ENST00000557027 670 ntBASIC18.83■□□□□ 0.6
PNMA3Q9UL41 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.83■□□□□ 0.6
PNMA3Q9UL41 AC100756.1-201ENST00000562736 682 ntBASIC18.83■□□□□ 0.6
PNMA3Q9UL41 AC138749.3-201ENST00000567691 622 ntBASIC18.83■□□□□ 0.6
PNMA3Q9UL41 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.83■□□□□ 0.6
PNMA3Q9UL41 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.83■□□□□ 0.6
PNMA3Q9UL41 AC116165.1-201ENST00000611806 668 ntBASIC18.83■□□□□ 0.6
PNMA3Q9UL41 AL109936.8-201ENST00000641772 604 ntBASIC18.83■□□□□ 0.6
PNMA3Q9UL41 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PNMA3Q9UL41 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.83■□□□□ 0.6
PNMA3Q9UL41 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PNMA3Q9UL41 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PNMA3Q9UL41 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PNMA3Q9UL41 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.83■□□□□ 0.6
PNMA3Q9UL41 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PNMA3Q9UL41 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms