Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.41■□□□□ 0.22
SPASTQ9UBP0 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPASTQ9UBP0 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.41■□□□□ 0.22
SPASTQ9UBP0 SPDYE7P-202ENST00000420373 878 ntBASIC16.41■□□□□ 0.22
SPASTQ9UBP0 GPS2P2-201ENST00000430745 888 ntBASIC16.41■□□□□ 0.22
SPASTQ9UBP0 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.41■□□□□ 0.22
SPASTQ9UBP0 BCRP1-201ENST00000444246 691 ntBASIC16.41■□□□□ 0.22
SPASTQ9UBP0 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.41■□□□□ 0.22
SPASTQ9UBP0 RNA5SP421-201ENST00000516864 134 ntBASIC16.41■□□□□ 0.22
SPASTQ9UBP0 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SPASTQ9UBP0 AC005498.2-205ENST00000593218 784 ntBASIC16.41■□□□□ 0.22
SPASTQ9UBP0 AC021097.1-201ENST00000607902 574 ntBASIC16.41■□□□□ 0.22
SPASTQ9UBP0 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.41■□□□□ 0.22
SPASTQ9UBP0 AC084121.4-201ENST00000641598 221 ntBASIC16.41■□□□□ 0.22
SPASTQ9UBP0 AF228730.8-201ENST00000642140 221 ntBASIC16.41■□□□□ 0.22
SPASTQ9UBP0 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPASTQ9UBP0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPASTQ9UBP0 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SPASTQ9UBP0 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPASTQ9UBP0 TUBB3P1-201ENST00000405796 1332 ntBASIC16.41■□□□□ 0.22
SPASTQ9UBP0 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPASTQ9UBP0 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPASTQ9UBP0 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 AC027307.2-201ENST00000591252 911 ntBASIC16.4■□□□□ 0.22
SPASTQ9UBP0 CYP2A7P1-201ENST00000595391 815 ntBASIC16.4■□□□□ 0.22
SPASTQ9UBP0 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 AC005915.1-201ENST00000624912 2018 ntBASIC16.4■□□□□ 0.22
SPASTQ9UBP0 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SPASTQ9UBP0 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
SPASTQ9UBP0 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
SPASTQ9UBP0 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SPASTQ9UBP0 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.39■□□□□ 0.21
SPASTQ9UBP0 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SPASTQ9UBP0 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.39■□□□□ 0.21
SPASTQ9UBP0 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPASTQ9UBP0 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPASTQ9UBP0 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPASTQ9UBP0 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SPASTQ9UBP0 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPASTQ9UBP0 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
SPASTQ9UBP0 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SPASTQ9UBP0 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SPASTQ9UBP0 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SPASTQ9UBP0 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SPASTQ9UBP0 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SPASTQ9UBP0 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPASTQ9UBP0 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SPASTQ9UBP0 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.39■□□□□ 0.21
SPASTQ9UBP0 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.39■□□□□ 0.21
SPASTQ9UBP0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SPASTQ9UBP0 KLF2P3-201ENST00000451977 1087 ntBASIC16.39■□□□□ 0.21
SPASTQ9UBP0 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SPASTQ9UBP0 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.39■□□□□ 0.21
SPASTQ9UBP0 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.39■□□□□ 0.21
SPASTQ9UBP0 DUX4L27-201ENST00000554796 1261 ntBASIC16.39■□□□□ 0.21
SPASTQ9UBP0 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.39■□□□□ 0.21
SPASTQ9UBP0 AC026150.2-201ENST00000564693 1156 ntBASIC16.39■□□□□ 0.21
SPASTQ9UBP0 AC051619.7-201ENST00000568314 623 ntBASIC16.39■□□□□ 0.21
SPASTQ9UBP0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SPASTQ9UBP0 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPASTQ9UBP0 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPASTQ9UBP0 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.39■□□□□ 0.21
SPASTQ9UBP0 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms