Protein–RNA interactions for Protein: Q9NQ35

NRIP3, Nuclear receptor-interacting protein 3, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRIP3Q9NQ35 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NRIP3Q9NQ35 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.87□□□□□ -0.03
NRIP3Q9NQ35 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NRIP3Q9NQ35 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NRIP3Q9NQ35 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NRIP3Q9NQ35 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
NRIP3Q9NQ35 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NRIP3Q9NQ35 TSPY26P-202ENST00000565928 3884 ntBASIC14.87□□□□□ -0.03
NRIP3Q9NQ35 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NRIP3Q9NQ35 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NRIP3Q9NQ35 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NRIP3Q9NQ35 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 PKD1P5-201ENST00000532415 10291 ntBASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 FAM185BP-201ENST00000443595 716 ntBASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 AC108073.2-201ENST00000464002 357 ntBASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 AC004790.2-201ENST00000623588 572 ntBASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NRIP3Q9NQ35 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 MIR4515-201ENST00000584082 81 ntBASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 ACTL9-202ENST00000612068 1252 ntBASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NRIP3Q9NQ35 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms