Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.8□□□□□ -0.04
TRAF4Q9BUZ4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAF4Q9BUZ4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAF4Q9BUZ4 LINC02012-201ENST00000608206 1725 ntBASIC14.8□□□□□ -0.04
TRAF4Q9BUZ4 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TRAF4Q9BUZ4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAF4Q9BUZ4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAF4Q9BUZ4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
TRAF4Q9BUZ4 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAF4Q9BUZ4 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TRAF4Q9BUZ4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAF4Q9BUZ4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAF4Q9BUZ4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAF4Q9BUZ4 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TRAF4Q9BUZ4 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAF4Q9BUZ4 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAF4Q9BUZ4 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAF4Q9BUZ4 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TRAF4Q9BUZ4 TNRC18P2-201ENST00000417666 2714 ntBASIC14.79□□□□□ -0.04
TRAF4Q9BUZ4 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.79□□□□□ -0.04
TRAF4Q9BUZ4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAF4Q9BUZ4 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAF4Q9BUZ4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAF4Q9BUZ4 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAF4Q9BUZ4 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAF4Q9BUZ4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAF4Q9BUZ4 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAF4Q9BUZ4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TRAF4Q9BUZ4 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAF4Q9BUZ4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAF4Q9BUZ4 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAF4Q9BUZ4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAF4Q9BUZ4 AP006288.1-201ENST00000446065 395 ntBASIC14.79□□□□□ -0.04
TRAF4Q9BUZ4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAF4Q9BUZ4 DNAJB3-202ENST00000449667 1266 ntBASIC14.79□□□□□ -0.04
TRAF4Q9BUZ4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAF4Q9BUZ4 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAF4Q9BUZ4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAF4Q9BUZ4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
TRAF4Q9BUZ4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.79□□□□□ -0.04
TRAF4Q9BUZ4 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAF4Q9BUZ4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAF4Q9BUZ4 AC104581.4-201ENST00000623126 3052 ntBASIC14.79□□□□□ -0.04
TRAF4Q9BUZ4 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAF4Q9BUZ4 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 IGLL3P-201ENST00000412472 434 ntBASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 PMS2P2-201ENST00000425039 1128 ntBASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 AC046185.3-201ENST00000623228 1824 ntBASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TRAF4Q9BUZ4 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.77□□□□□ -0.04
TRAF4Q9BUZ4 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAF4Q9BUZ4 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
TRAF4Q9BUZ4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAF4Q9BUZ4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms