Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC10.97□□□□□ -0.65
LITAFQ99732 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC10.97□□□□□ -0.65
LITAFQ99732 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC10.97□□□□□ -0.65
LITAFQ99732 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC10.97□□□□□ -0.65
LITAFQ99732 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC10.97□□□□□ -0.65
LITAFQ99732 GPX4-207ENST00000589115 812 ntTSL 2 BASIC10.97□□□□□ -0.65
LITAFQ99732 AC005336.2-201ENST00000593183 939 ntBASIC10.97□□□□□ -0.65
LITAFQ99732 SIGLEC29P-201ENST00000599873 1114 ntBASIC10.97□□□□□ -0.65
LITAFQ99732 AC073592.5-201ENST00000624854 528 ntBASIC10.97□□□□□ -0.65
LITAFQ99732 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC10.97□□□□□ -0.65
LITAFQ99732 AC243591.1-201ENST00000452967 1364 ntBASIC10.97□□□□□ -0.65
LITAFQ99732 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
LITAFQ99732 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LITAFQ99732 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LITAFQ99732 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LITAFQ99732 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LITAFQ99732 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LITAFQ99732 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC10.97□□□□□ -0.65
LITAFQ99732 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LITAFQ99732 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LITAFQ99732 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LITAFQ99732 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LITAFQ99732 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LITAFQ99732 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LITAFQ99732 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LITAFQ99732 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LITAFQ99732 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
LITAFQ99732 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LITAFQ99732 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
LITAFQ99732 AC105250.1-201ENST00000509378 2057 ntBASIC10.97□□□□□ -0.65
LITAFQ99732 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC10.97□□□□□ -0.65
LITAFQ99732 AL137784.3-201ENST00000623858 2288 ntBASIC10.97□□□□□ -0.65
LITAFQ99732 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC10.97□□□□□ -0.65
LITAFQ99732 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LITAFQ99732 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LITAFQ99732 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
LITAFQ99732 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
LITAFQ99732 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
LITAFQ99732 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
LITAFQ99732 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LITAFQ99732 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC10.96□□□□□ -0.65
LITAFQ99732 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LITAFQ99732 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC10.96□□□□□ -0.65
LITAFQ99732 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC10.96□□□□□ -0.65
LITAFQ99732 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC10.96□□□□□ -0.65
LITAFQ99732 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
LITAFQ99732 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LITAFQ99732 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LITAFQ99732 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC10.96□□□□□ -0.65
LITAFQ99732 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LITAFQ99732 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC10.96□□□□□ -0.65
LITAFQ99732 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC10.96□□□□□ -0.65
LITAFQ99732 HBZP1-201ENST00000354915 429 ntBASIC10.96□□□□□ -0.65
LITAFQ99732 FAM8A6P-201ENST00000407496 1135 ntBASIC10.96□□□□□ -0.65
LITAFQ99732 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
LITAFQ99732 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC10.96□□□□□ -0.65
LITAFQ99732 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC10.96□□□□□ -0.65
LITAFQ99732 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC10.96□□□□□ -0.65
LITAFQ99732 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC10.96□□□□□ -0.65
LITAFQ99732 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC10.96□□□□□ -0.65
LITAFQ99732 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC10.96□□□□□ -0.65
LITAFQ99732 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC10.96□□□□□ -0.65
LITAFQ99732 AL353801.3-201ENST00000609898 542 ntBASIC10.96□□□□□ -0.65
LITAFQ99732 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
LITAFQ99732 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
LITAFQ99732 ABBA01031661.1-201ENST00000634362 1253 ntBASIC10.96□□□□□ -0.65
LITAFQ99732 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
LITAFQ99732 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.66
LITAFQ99732 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LITAFQ99732 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LITAFQ99732 C18orf15-201ENST00000623680 2534 ntBASIC10.96□□□□□ -0.66
LITAFQ99732 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LITAFQ99732 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC10.96□□□□□ -0.66
LITAFQ99732 CELP-203ENST00000624767 2414 ntTSL 5 BASIC10.96□□□□□ -0.66
LITAFQ99732 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC10.96□□□□□ -0.66
LITAFQ99732 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC10.96□□□□□ -0.66
LITAFQ99732 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
LITAFQ99732 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.66
LITAFQ99732 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
LITAFQ99732 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
LITAFQ99732 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC10.96□□□□□ -0.66
LITAFQ99732 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LITAFQ99732 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LITAFQ99732 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC10.95□□□□□ -0.66
LITAFQ99732 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC10.95□□□□□ -0.66
LITAFQ99732 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LITAFQ99732 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC10.95□□□□□ -0.66
LITAFQ99732 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LITAFQ99732 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LITAFQ99732 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LITAFQ99732 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
LITAFQ99732 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
LITAFQ99732 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
LITAFQ99732 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
LITAFQ99732 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LITAFQ99732 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LITAFQ99732 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LITAFQ99732 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LITAFQ99732 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC10.95□□□□□ -0.66
LITAFQ99732 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms