Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLCC1Q96S66 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLCC1Q96S66 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLCC1Q96S66 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
CLCC1Q96S66 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLCC1Q96S66 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CLCC1Q96S66 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLCC1Q96S66 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLCC1Q96S66 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLCC1Q96S66 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLCC1Q96S66 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLCC1Q96S66 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLCC1Q96S66 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLCC1Q96S66 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLCC1Q96S66 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLCC1Q96S66 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLCC1Q96S66 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLCC1Q96S66 AC092171.3-201ENST00000610122 2651 ntBASIC13.96□□□□□ -0.17
CLCC1Q96S66 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC13.96□□□□□ -0.17
CLCC1Q96S66 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLCC1Q96S66 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.96□□□□□ -0.17
CLCC1Q96S66 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.96□□□□□ -0.17
CLCC1Q96S66 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLCC1Q96S66 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLCC1Q96S66 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
CLCC1Q96S66 IGHV3-47-201ENST00000425060 335 ntBASIC13.96□□□□□ -0.17
CLCC1Q96S66 ATP5G2P1-201ENST00000433580 426 ntBASIC13.96□□□□□ -0.17
CLCC1Q96S66 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLCC1Q96S66 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC13.96□□□□□ -0.17
CLCC1Q96S66 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13.96□□□□□ -0.17
CLCC1Q96S66 AC124947.2-201ENST00000547118 1133 ntBASIC13.96□□□□□ -0.17
CLCC1Q96S66 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC13.96□□□□□ -0.17
CLCC1Q96S66 AC012615.1-201ENST00000565797 1299 ntBASIC13.96□□□□□ -0.17
CLCC1Q96S66 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
CLCC1Q96S66 BNIP3P18-201ENST00000593976 575 ntBASIC13.96□□□□□ -0.17
CLCC1Q96S66 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLCC1Q96S66 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.96□□□□□ -0.17
CLCC1Q96S66 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLCC1Q96S66 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC13.96□□□□□ -0.17
CLCC1Q96S66 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLCC1Q96S66 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLCC1Q96S66 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLCC1Q96S66 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLCC1Q96S66 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLCC1Q96S66 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.96□□□□□ -0.18
CLCC1Q96S66 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CLCC1Q96S66 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.96□□□□□ -0.18
CLCC1Q96S66 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
CLCC1Q96S66 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
CLCC1Q96S66 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
CLCC1Q96S66 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLCC1Q96S66 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CLCC1Q96S66 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLCC1Q96S66 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLCC1Q96S66 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.96□□□□□ -0.18
CLCC1Q96S66 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.96□□□□□ -0.18
CLCC1Q96S66 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CLCC1Q96S66 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLCC1Q96S66 AP002414.2-201ENST00000591780 3365 ntBASIC13.96□□□□□ -0.18
CLCC1Q96S66 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CLCC1Q96S66 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CLCC1Q96S66 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLCC1Q96S66 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLCC1Q96S66 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.95□□□□□ -0.18
CLCC1Q96S66 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CLCC1Q96S66 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLCC1Q96S66 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLCC1Q96S66 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CLCC1Q96S66 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLCC1Q96S66 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.95□□□□□ -0.18
CLCC1Q96S66 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLCC1Q96S66 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CLCC1Q96S66 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CLCC1Q96S66 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLCC1Q96S66 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLCC1Q96S66 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CLCC1Q96S66 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC13.95□□□□□ -0.18
CLCC1Q96S66 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
CLCC1Q96S66 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CLCC1Q96S66 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CLCC1Q96S66 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.95□□□□□ -0.18
CLCC1Q96S66 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLCC1Q96S66 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLCC1Q96S66 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.95□□□□□ -0.18
CLCC1Q96S66 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLCC1Q96S66 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CLCC1Q96S66 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC13.95□□□□□ -0.18
CLCC1Q96S66 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
CLCC1Q96S66 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLCC1Q96S66 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC13.95□□□□□ -0.18
CLCC1Q96S66 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.95□□□□□ -0.18
CLCC1Q96S66 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC13.95□□□□□ -0.18
CLCC1Q96S66 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.95□□□□□ -0.18
CLCC1Q96S66 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLCC1Q96S66 HCG4P8-203ENST00000443049 980 ntBASIC13.95□□□□□ -0.18
CLCC1Q96S66 DANCR-204ENST00000444958 709 ntTSL 3 BASIC13.95□□□□□ -0.18
CLCC1Q96S66 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC13.95□□□□□ -0.18
CLCC1Q96S66 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.95□□□□□ -0.18
CLCC1Q96S66 AC011467.2-201ENST00000598425 242 ntBASIC13.95□□□□□ -0.18
CLCC1Q96S66 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms