Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SUSD3Q96L08 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SUSD3Q96L08 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SUSD3Q96L08 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.31■□□□□ 0.36
SUSD3Q96L08 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SUSD3Q96L08 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SUSD3Q96L08 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SUSD3Q96L08 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SUSD3Q96L08 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SUSD3Q96L08 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.31■□□□□ 0.36
SUSD3Q96L08 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
SUSD3Q96L08 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SUSD3Q96L08 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.31■□□□□ 0.36
SUSD3Q96L08 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SUSD3Q96L08 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SUSD3Q96L08 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.31■□□□□ 0.36
SUSD3Q96L08 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SUSD3Q96L08 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SUSD3Q96L08 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.31■□□□□ 0.36
SUSD3Q96L08 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SUSD3Q96L08 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SUSD3Q96L08 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.31■□□□□ 0.36
SUSD3Q96L08 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SUSD3Q96L08 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SUSD3Q96L08 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SUSD3Q96L08 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.31■□□□□ 0.36
SUSD3Q96L08 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SUSD3Q96L08 AL512361.1-201ENST00000554200 418 ntBASIC17.31■□□□□ 0.36
SUSD3Q96L08 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.31■□□□□ 0.36
SUSD3Q96L08 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.31■□□□□ 0.36
SUSD3Q96L08 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.31■□□□□ 0.36
SUSD3Q96L08 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SUSD3Q96L08 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.31■□□□□ 0.36
SUSD3Q96L08 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SUSD3Q96L08 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SUSD3Q96L08 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SUSD3Q96L08 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
SUSD3Q96L08 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SUSD3Q96L08 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SUSD3Q96L08 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SUSD3Q96L08 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SUSD3Q96L08 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SUSD3Q96L08 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.31■□□□□ 0.36
SUSD3Q96L08 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SUSD3Q96L08 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SUSD3Q96L08 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SUSD3Q96L08 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SUSD3Q96L08 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SUSD3Q96L08 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SUSD3Q96L08 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.3■□□□□ 0.36
SUSD3Q96L08 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.3■□□□□ 0.36
SUSD3Q96L08 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SUSD3Q96L08 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SUSD3Q96L08 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SUSD3Q96L08 SPTLC1P1-201ENST00000447199 261 ntBASIC17.3■□□□□ 0.36
SUSD3Q96L08 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.3■□□□□ 0.36
SUSD3Q96L08 SERBP1P3-201ENST00000459980 809 ntBASIC17.3■□□□□ 0.36
SUSD3Q96L08 RN7SL618P-201ENST00000477850 296 ntBASIC17.3■□□□□ 0.36
SUSD3Q96L08 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SUSD3Q96L08 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.3■□□□□ 0.36
SUSD3Q96L08 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SUSD3Q96L08 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.3■□□□□ 0.36
SUSD3Q96L08 AC010336.2-201ENST00000564226 506 ntBASIC17.3■□□□□ 0.36
SUSD3Q96L08 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
SUSD3Q96L08 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SUSD3Q96L08 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SUSD3Q96L08 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SUSD3Q96L08 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SUSD3Q96L08 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.3■□□□□ 0.36
SUSD3Q96L08 AL592424.1-201ENST00000563624 1536 ntBASIC17.3■□□□□ 0.36
SUSD3Q96L08 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SUSD3Q96L08 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SUSD3Q96L08 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SUSD3Q96L08 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SUSD3Q96L08 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.3■□□□□ 0.36
SUSD3Q96L08 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SUSD3Q96L08 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.3■□□□□ 0.36
SUSD3Q96L08 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
SUSD3Q96L08 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SUSD3Q96L08 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SUSD3Q96L08 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SUSD3Q96L08 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SUSD3Q96L08 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.29■□□□□ 0.36
SUSD3Q96L08 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SUSD3Q96L08 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SUSD3Q96L08 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SUSD3Q96L08 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SUSD3Q96L08 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SUSD3Q96L08 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SUSD3Q96L08 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SUSD3Q96L08 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SUSD3Q96L08 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SUSD3Q96L08 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SUSD3Q96L08 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SUSD3Q96L08 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SUSD3Q96L08 AC015922.1-201ENST00000421102 1152 ntBASIC17.29■□□□□ 0.36
SUSD3Q96L08 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.29■□□□□ 0.36
SUSD3Q96L08 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.29■□□□□ 0.36
SUSD3Q96L08 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
SUSD3Q96L08 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms