Protein–RNA interactions for Protein: Q96CP6

GRAMD1A, GRAM domain-containing protein 1A, humanhuman

Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1AQ96CP6 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.97■□□□□ 0.31
GRAMD1AQ96CP6 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
GRAMD1AQ96CP6 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GRAMD1AQ96CP6 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GRAMD1AQ96CP6 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
GRAMD1AQ96CP6 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.97■□□□□ 0.31
GRAMD1AQ96CP6 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GRAMD1AQ96CP6 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.97■□□□□ 0.31
GRAMD1AQ96CP6 AC211486.1-202ENST00000416371 468 ntBASIC16.97■□□□□ 0.31
GRAMD1AQ96CP6 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.97■□□□□ 0.31
GRAMD1AQ96CP6 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.97■□□□□ 0.31
GRAMD1AQ96CP6 AC211476.1-201ENST00000503899 468 ntBASIC16.97■□□□□ 0.31
GRAMD1AQ96CP6 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
GRAMD1AQ96CP6 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.97■□□□□ 0.31
GRAMD1AQ96CP6 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.97■□□□□ 0.31
GRAMD1AQ96CP6 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.97■□□□□ 0.31
GRAMD1AQ96CP6 AC064836.3-201ENST00000607928 673 ntBASIC16.97■□□□□ 0.31
GRAMD1AQ96CP6 AC019129.2-201ENST00000609837 1235 ntBASIC16.97■□□□□ 0.31
GRAMD1AQ96CP6 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GRAMD1AQ96CP6 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
GRAMD1AQ96CP6 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
GRAMD1AQ96CP6 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GRAMD1AQ96CP6 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GRAMD1AQ96CP6 AL645728.1-201ENST00000366221 2101 ntBASIC16.97■□□□□ 0.31
GRAMD1AQ96CP6 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GRAMD1AQ96CP6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GRAMD1AQ96CP6 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 TUBB8P12-201ENST00000308911 1335 ntBASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 TUBB7P-202ENST00000428444 1305 ntBASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 TUBB8P7-204ENST00000567960 1332 ntBASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 AC073621.1-201ENST00000392730 636 ntBASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 SPDYE21P-201ENST00000413323 827 ntBASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 AC007967.2-201ENST00000432613 625 ntBASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 IGHV3-52-201ENST00000519770 353 ntBASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 AC002310.6-201ENST00000624451 1377 ntBASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 PKD1P5-201ENST00000532415 10291 ntBASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GRAMD1AQ96CP6 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
GRAMD1AQ96CP6 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
GRAMD1AQ96CP6 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
GRAMD1AQ96CP6 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
GRAMD1AQ96CP6 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GRAMD1AQ96CP6 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GRAMD1AQ96CP6 NFIC-211ENST00000641145 8399 ntBASIC16.95■□□□□ 0.3
GRAMD1AQ96CP6 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.95■□□□□ 0.3
GRAMD1AQ96CP6 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.95■□□□□ 0.3
GRAMD1AQ96CP6 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GRAMD1AQ96CP6 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GRAMD1AQ96CP6 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GRAMD1AQ96CP6 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.95■□□□□ 0.3
GRAMD1AQ96CP6 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
GRAMD1AQ96CP6 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GRAMD1AQ96CP6 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GRAMD1AQ96CP6 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GRAMD1AQ96CP6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.95■□□□□ 0.3
GRAMD1AQ96CP6 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GRAMD1AQ96CP6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.95■□□□□ 0.3
GRAMD1AQ96CP6 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GRAMD1AQ96CP6 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GRAMD1AQ96CP6 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
GRAMD1AQ96CP6 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GRAMD1AQ96CP6 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GRAMD1AQ96CP6 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
GRAMD1AQ96CP6 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.95■□□□□ 0.3
GRAMD1AQ96CP6 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GRAMD1AQ96CP6 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.95■□□□□ 0.3
GRAMD1AQ96CP6 RPS8P6-201ENST00000426177 609 ntBASIC16.95■□□□□ 0.3
GRAMD1AQ96CP6 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.95■□□□□ 0.3
GRAMD1AQ96CP6 HMGN1P19-201ENST00000436976 333 ntBASIC16.95■□□□□ 0.3
GRAMD1AQ96CP6 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms